RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
NPHP4-208ENST00000478423 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
NPHP4-208ENST00000478423 ABCA9Q8IUA7 1624 aa16.04■□□□□ 0.16
NPHP4-208ENST00000478423 CCDC172P0C7W6 258 aa16.04■□□□□ 0.16
NPHP4-208ENST00000478423 SP4Q02446 784 aa16.04■□□□□ 0.16
NPHP4-208ENST00000478423 STAMQ92783 540 aa16.04■□□□□ 0.16
NPHP4-208ENST00000478423 PDIA3P30101 505 aaKnown RBP16.03■□□□□ 0.16
NPHP4-208ENST00000478423 USP37Q86T82 979 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 ADGRL3Q9HAR2 1447 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 ZNF804BA4D1E1 1349 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 PDE4DQ08499 809 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 EPHA10Q5JZY3 1008 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 PKD2L1Q9P0L9 805 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
NPHP4-208ENST00000478423 KIF5AQ12840 1032 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 ADCY9O60503 1353 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 TRAF5O00463 557 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 POLR3GO15318 223 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-208ENST00000478423 KARSQ15046 597 aaKnown RBP16.02■□□□□ 0.16
NPHP4-208ENST00000478423 PI4K2BQ8TCG2 481 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 TBC1D5Q92609 795 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-208ENST00000478423 VPS16Q9H269 839 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 E9PCH4 1651 aa16.02■□□□□ 0.16
NPHP4-208ENST00000478423 ATP2B4P23634 1241 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 NF2P35240 595 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.02■□□□□ 0.15
NPHP4-208ENST00000478423 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.15
NPHP4-208ENST00000478423 V9GYY5 206 aaPredicted RBP16.02■□□□□ 0.15
NPHP4-208ENST00000478423 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 H7C1W4 665 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 KIAA0754O94854 1291 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 ADALQ6DHV7 355 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 CCDC65Q8IXS2 484 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 MLKLQ8NB16 471 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 PNMA1Q8ND90 353 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.15
NPHP4-208ENST00000478423 QTRT2Q9H974 415 aaKnown RBP16.02■□□□□ 0.15
NPHP4-208ENST00000478423 NFE2L3Q9Y4A8 694 aa16.02■□□□□ 0.15
NPHP4-208ENST00000478423 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 PPIP5K2O43314 1243 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 SCRN1Q12765 414 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 FBXO18Q8NFZ0 1043 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 LZTS2Q9BRK4 669 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 CROCC2H7BZ55 1655 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 ANKRD62A6NC57 917 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 KIAA0825Q8IV33 1275 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 REXO1Q8N1G1 1221 aaKnown RBP16.01■□□□□ 0.15
NPHP4-208ENST00000478423 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 KRT86O43790 486 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 NOSTRINQ8IVI9 506 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 FERMT2Q96AC1 680 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
NPHP4-208ENST00000478423 PDE6BP35913 854 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 KRT83P78385 493 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 FANCCQ00597 558 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 IFFO1Q0D2I5 559 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 IFI16Q16666 785 aaKnown RBP16■□□□□ 0.15
NPHP4-208ENST00000478423 GLT8D2Q9H1C3 349 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 BACH1O14867 736 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 ADCY7P51828 1080 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CNGA4Q8IV77 575 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 GUCA1BQ9UMX6 200 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 NR1I2O75469 434 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CTAGE8P0CG41 777 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 DLGAP5Q15398 846 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 DOK7Q18PE1 504 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 NLGN1Q8N2Q7 840 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 UIMC1Q96RL1 719 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 DNAI2Q9GZS0 605 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 GOPCQ9HD26 462 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CTNND2Q9UQB3 1225 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 PHACTR2O75167 634 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 TACC1O75410 805 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 SCNN1DP51172 638 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 POSTNQ15063 836 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 ERFEQ4G0M1 354 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CPXCR1Q8N123 301 aa16■□□□□ 0.15
NPHP4-208ENST00000478423 CHMP2AO43633 222 aa15.99■□□□□ 0.15
NPHP4-208ENST00000478423 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
NPHP4-208ENST00000478423 BAG1Q99933 345 aaPredicted RBP15.99■□□□□ 0.15
NPHP4-208ENST00000478423 SLU7O95391 586 aaKnown RBP15.99■□□□□ 0.15
NPHP4-208ENST00000478423 CTNNA2P26232 953 aa15.99■□□□□ 0.15
NPHP4-208ENST00000478423 MTX1Q13505 466 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms