RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 A0A096LPE4 126 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 A0A1W2PPZ6 126 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L15C9J2P7 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L10C9JJH3 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L13C9JLJ4 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L12C9JPN9 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L11C9JVI0 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L21D6R901 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L18D6R9N7 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L22D6RA61 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L17D6RBQ6 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L19D6RCP7 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L20D6RJB6 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 TGM1P22735 817 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 PDE6BP35913 854 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 USP17L24Q0WX57 530 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 FKBP5Q13451 457 aaPredicted RBP4.81□□□□□ -1.64
CALD1-218ENST00000478075 SNX17Q15036 470 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
CALD1-218ENST00000478075 ZFPM1Q8IX07 1006 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 MFSD4AQ8N468 514 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 PDZD8Q8NEN9 1154 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 SGPP1Q9BX95 441 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 C1QTNF3Q9BXJ4 246 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 KRT82Q9NSB4 513 aa4.81□□□□□ -1.64
CALD1-218ENST00000478075 YBX2Q9Y2T7 364 aaKnown RBP4.81□□□□□ -1.64
CALD1-218ENST00000478075 TNFRSF10BO14763 440 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 PURAQ00577 322 aaKnown RBP4.8□□□□□ -1.64
CALD1-218ENST00000478075 KIF4BQ2VIQ3 1234 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 TMPRSS7Q7RTY8 843 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 TTC9BQ8N6N2 239 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 PANK1Q8TE04 598 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 SAP130Q9H0E3 1048 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 CHRDQ9H2X0 955 aa4.8□□□□□ -1.64
CALD1-218ENST00000478075 DNAJC25-GNG10A0A024R161 153 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 FITM1A5D6W6 292 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 H3BS24 57 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 N4BP3O15049 544 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 PRICKLE3O43900 615 aaPredicted RBP4.79□□□□□ -1.64
CALD1-218ENST00000478075 ECEL1O95672 775 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 ERVFC1P60507 584 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 CDKAL1Q5VV42 579 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 ISL2Q96A47 359 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 DNAJC25Q9H1X3 360 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 SIRT5Q9NXA8 310 aa4.79□□□□□ -1.64
CALD1-218ENST00000478075 PHACTR2O75167 634 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 LIG1P18858 919 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 KCNC1P48547 511 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 NR0B2Q15466 257 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 HDGFL1Q5TGJ6 251 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 OLFML2BQ68BL8 750 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 CNKSR3Q6P9H4 555 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 ZNF575Q86XF7 245 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 RNF214Q8ND24 703 aa4.78□□□□□ -1.64
CALD1-218ENST00000478075 MAFBQ9Y5Q3 323 aaPredicted RBP4.78□□□□□ -1.64
CALD1-218ENST00000478075 A0A1W2PP55 124 aa4.77□□□□□ -1.65
CALD1-218ENST00000478075 RALGPS1Q5JS13 557 aa4.77□□□□□ -1.65
CALD1-218ENST00000478075 FAM26DQ5JW98 314 aa4.77□□□□□ -1.65
CALD1-218ENST00000478075 SNX29Q8TEQ0 813 aa4.77□□□□□ -1.65
CALD1-218ENST00000478075 COG6Q9Y2V7 657 aa4.77□□□□□ -1.65
CALD1-218ENST00000478075 OR14I1A6ND48 311 aa4.76□□□□□ -1.65
CALD1-218ENST00000478075 HNRNPA0Q13151 305 aaKnown RBP4.76□□□□□ -1.65
CALD1-218ENST00000478075 PPP1R13LQ8WUF5 828 aa4.76□□□□□ -1.65
CALD1-218ENST00000478075 DHX38Q92620 1227 aaKnown RBP4.76□□□□□ -1.65
CALD1-218ENST00000478075 SYTL4Q96C24 671 aaPredicted RBP4.76□□□□□ -1.65
CALD1-218ENST00000478075 COX4I2Q96KJ9 171 aa4.76□□□□□ -1.65
CALD1-218ENST00000478075 PCDHGC5Q9Y5F6 944 aa4.76□□□□□ -1.65
CALD1-218ENST00000478075 METTL12A8MUP2 240 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 EREGO14944 169 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 NEFMP07197 916 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 ERVK-24P63145 666 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 SRSF3P84103 164 aaKnown RBP4.75□□□□□ -1.65
CALD1-218ENST00000478075 CAP1Q01518 475 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 SMN1Q16637 294 aaKnown RBP4.75□□□□□ -1.65
CALD1-218ENST00000478075 VMACQ2NL98 169 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 SFRP5Q5T4F7 317 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 SPPL2CQ8IUH8 684 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 CCNJLQ8IV13 435 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 PIWIL2Q8TC59 973 aaKnown RBP4.75□□□□□ -1.65
CALD1-218ENST00000478075 FAM200AQ8TCP9 573 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 CCDC86Q9H6F5 360 aaKnown RBP4.75□□□□□ -1.65
CALD1-218ENST00000478075 USP40Q9NVE5 1235 aa4.75□□□□□ -1.65
CALD1-218ENST00000478075 MBD1Q9UIS9 605 aaPredicted RBP4.75□□□□□ -1.65
CALD1-218ENST00000478075 EOMESO95936 686 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 C8orf34Q49A92 452 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 ZNF746Q6NUN9 644 aaPredicted RBP4.74□□□□□ -1.65
CALD1-218ENST00000478075 CRIP3Q6Q6R5 217 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 ADAMTS19Q8TE59 1207 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 UBE2FQ969M7 185 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 ARXQ96QS3 562 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 PCED1AQ9H1Q7 454 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 AMOTL2Q9Y2J4 779 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 ST14Q9Y5Y6 855 aa4.74□□□□□ -1.65
CALD1-218ENST00000478075 IRS4O14654 1257 aaPredicted RBP4.73□□□□□ -1.65
CALD1-218ENST00000478075 ZNF20P17024 532 aa4.73□□□□□ -1.65
CALD1-218ENST00000478075 TRHRP34981 398 aaPredicted RBP4.73□□□□□ -1.65
CALD1-218ENST00000478075 CHRNEQ04844 493 aa4.73□□□□□ -1.65
CALD1-218ENST00000478075 NEUROD2Q15784 382 aa4.73□□□□□ -1.65
CALD1-218ENST00000478075 PEAR1Q5VY43 1037 aaPredicted RBP4.73□□□□□ -1.65
CALD1-218ENST00000478075 KCT2Q8NC54 265 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms