RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 RASGRP4Q8TDF6 673 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 MRFAP1L1Q96HT8 127 aa11.16□□□□□ -0.62
CMC1-209ENST00000477739 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
CMC1-209ENST00000477739 NLRP12P59046 1061 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 WTAPQ15007 396 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 RTN1Q16799 776 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 NBPF11Q86T75 865 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 N4BP3O15049 544 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 CYP7A1P22680 504 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
CMC1-209ENST00000477739 GTPBP4Q9BZE4 634 aaKnown RBP11.15□□□□□ -0.62
CMC1-209ENST00000477739 TAB2Q9NYJ8 693 aa11.15□□□□□ -0.62
CMC1-209ENST00000477739 NEDD4P46934 1319 aa11.15□□□□□ -0.63
CMC1-209ENST00000477739 TEX33O43247 280 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 ANTXR2P58335 489 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 RNASE9P60153 205 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 TTF1Q15361 905 aaPredicted RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 SHC4Q6S5L8 630 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 TRMT1LQ7Z2T5 733 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 ZNF274Q96GC6 653 aaPredicted RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 OAS2P29728 719 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 ST5P78524 1137 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 PPP2R3AQ06190 1150 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 BMS1Q14692 1282 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 APOA5Q6Q788 366 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 ACRBPQ8NEB7 543 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 ZSWIM5Q9P217 1185 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 HOOK1Q9UJC3 728 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 DDX41Q9UJV9 622 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMC1-209ENST00000477739 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 EXOSC10Q01780 885 aaKnown RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 ATP2B2Q01814 1243 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 AXDND1Q5T1B0 1012 aaPredicted RBP11.14□□□□□ -0.63
CMC1-209ENST00000477739 RRAGBQ5VZM2 374 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 KRBA2Q6ZNG9 492 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 ANKRD7Q92527 254 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 CTNND2Q9UQB3 1225 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 RFX7Q2KHR2 1363 aa11.14□□□□□ -0.63
CMC1-209ENST00000477739 PDE8AO60658 829 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 SLC5A1P13866 664 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 ETF1P62495 437 aaKnown RBP11.13□□□□□ -0.63
CMC1-209ENST00000477739 RBM6P78332 1123 aaKnown RBP11.13□□□□□ -0.63
CMC1-209ENST00000477739 CENPHQ9H3R5 247 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 ZHX3Q9H4I2 956 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 TPM1P09493 284 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 IGHMBP2P38935 993 aaKnown RBP11.13□□□□□ -0.63
CMC1-209ENST00000477739 GYG1P46976 350 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
CMC1-209ENST00000477739 TTC19Q6DKK2 380 aaPredicted RBP11.13□□□□□ -0.63
CMC1-209ENST00000477739 IGSF22Q8N9C0 903 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 SMARCC2Q8TAQ2 1214 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 FEZ1Q99689 392 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 CBFA2T2O43439 604 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 NMT2O60551 498 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 PDE8BO95263 885 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 PDE6AP16499 860 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 DCCP43146 1447 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
CMC1-209ENST00000477739 KIF1AQ12756 1690 aa11.13□□□□□ -0.63
CMC1-209ENST00000477739 CCDC66A2RUB6 948 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 NEMFO60524 1076 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 CDKL5O76039 1030 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
CMC1-209ENST00000477739 TFCP2L1Q9NZI6 479 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 USP54Q70EL1 1684 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 RGS22Q8NE09 1264 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
CMC1-209ENST00000477739 CAMTA1Q9Y6Y1 1673 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 NLRP5P59047 1200 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 POSTNQ15063 836 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 TERF2Q15554 542 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 PIK3AP1Q6ZUJ8 805 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 GSPT2Q8IYD1 628 aaKnown RBP11.12□□□□□ -0.63
CMC1-209ENST00000477739 CSRNP2Q9H175 543 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 FBXO3Q9UK99 471 aa11.12□□□□□ -0.63
CMC1-209ENST00000477739 ZSCAN12O43309 604 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 MARCH6O60337 910 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 PNMA6AP0CW24 399 aaPredicted RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 EVX2Q03828 476 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 HSP90B2PQ58FF3 399 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 NACAP1Q9BZK3 213 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms