RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SIK1P57059 783 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 SLC39A14Q15043 492 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 TNNI3KQ59H18 835 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 TTLL7Q6ZT98 887 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 VIPAS39Q9H9C1 493 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 FPGT-TNNI3KV9GXZ4 949 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 ECM29Q5VYK3 1845 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 KIF5CO60282 957 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 MCM6Q14566 821 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 TOGARAM2Q6ZUX3 1019 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 PACS2Q86VP3 889 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 CTCFLQ8NI51 663 aaPredicted RBP17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 SEC62Q99442 399 aaKnown RBP17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 INTS13Q9NVM9 706 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 FAN1Q9Y2M0 1017 aa17.4■□□□□ 0.38
CLSTN1-205ENST00000477264 E7EWF7 191 aa17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 EIF5P55010 431 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 ZBTB3Q9H5J0 574 aa17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 GCKRQ14397 625 aa17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 SWT1Q5T5J6 900 aaKnown RBP17.39■□□□□ 0.37
CLSTN1-205ENST00000477264 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 FAM182BQ5T319 152 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 CERS3Q8IU89 383 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 FANCLQ9NW38 375 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 MCM3P25205 808 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 CASP8Q14790 479 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 ZNF772Q68DY9 489 aaPredicted RBP17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 PDILTQ8N807 584 aa17.38■□□□□ 0.37
CLSTN1-205ENST00000477264 NHSQ6T4R5 1651 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 A0A087WUV0 522 aaPredicted RBP17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 ATP5J2-PTCD1G3V325 749 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 AARSP49588 968 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 RESP18Q5W5W9 173 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 LRRC31Q6UY01 552 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 MMS22LQ6ZRQ5 1243 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 CNNM3Q8NE01 707 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 RAI14Q9P0K7 980 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 AKAP2Q9Y2D5 859 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
CLSTN1-205ENST00000477264 ZNF18P17022 549 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 CCDC91Q7Z6B0 441 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 ABCB6Q9NP58 842 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 MYO1AQ9UBC5 1043 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 CTAGE9A4FU28 777 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 AKR1B15C9JRZ8 316 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 POLR3DP05423 398 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 GOLGA8FQ08AF8 430 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 GOLGA8DPQ0D2H9 430 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 KARSQ15046 597 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 DNAJC21Q5F1R6 531 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 MCTP2Q6DN12 878 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 WDR93Q6P2C0 686 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 TADA2BQ86TJ2 420 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 TRIML1Q8N9V2 468 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 MLKLQ8NB16 471 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 ENOX1Q8TC92 643 aaKnown RBP17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 CEP89Q96ST8 783 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 PNKPQ96T60 521 aa17.36■□□□□ 0.37
CLSTN1-205ENST00000477264 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 BTAF1O14981 1849 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CTAGE15A4D2H0 777 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CTAGE8P0CG41 777 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 MMP14P50281 582 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 MAP9Q49MG5 647 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CTAGE6Q86UF2 777 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CTAGE4Q8IX94 777 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 AFAP1L1Q8TED9 768 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CCDC102AQ96A19 550 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 MRPL44Q9H9J2 332 aaKnown RBP17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 ADGRG1Q9Y653 693 aa17.35■□□□□ 0.37
CLSTN1-205ENST00000477264 A0A087WZG4 1122 aa17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 CRKLP46109 303 aaKnown RBP17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 PNOCQ13519 176 aa17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 CWC25Q9NXE8 425 aaPredicted RBP17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 SBF2Q86WG5 1849 aa17.34■□□□□ 0.37
CLSTN1-205ENST00000477264 USP8P40818 1118 aa17.33■□□□□ 0.37
CLSTN1-205ENST00000477264 ITPK1Q13572 414 aa17.33■□□□□ 0.37
CLSTN1-205ENST00000477264 METTL16Q86W50 562 aaKnown RBP17.33■□□□□ 0.37
CLSTN1-205ENST00000477264 PUF60Q9UHX1 559 aaKnown RBP17.33■□□□□ 0.37
CLSTN1-205ENST00000477264 CPLX1O14810 134 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms