RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 CNKSR2Q8WXI2 1034 aa25.28■■□□□ 1.64
MAP1LC3A-204ENST00000476428 OPTNQ96CV9 577 aa25.28■■□□□ 1.64
MAP1LC3A-204ENST00000476428 ZBTB48P10074 688 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-204ENST00000476428 SLC4A8Q2Y0W8 1093 aa25.27■■□□□ 1.64
MAP1LC3A-204ENST00000476428 FOXP4Q8IVH2 680 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-204ENST00000476428 DCP1AQ9NPI6 582 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-204ENST00000476428 MLLT1Q03111 559 aaPredicted RBP25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 STRBPQ96SI9 672 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 BEGAINQ9BUH8 593 aa25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 HERC5Q9UII4 1024 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-204ENST00000476428 SPDYE5A6NIY4 337 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 HLA-DOAP06340 250 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 ZMYM1Q5SVZ6 1142 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 ERO1BQ86YB8 467 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 REM2Q8IYK8 340 aaPredicted RBP25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 SLC4A4Q9Y6R1 1079 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 THSD7BQ9C0I4 1608 aa25.25■■□□□ 1.63
MAP1LC3A-204ENST00000476428 M0R2C6 588 aa25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 TTC6Q86TZ1 520 aa25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 OTUD5Q96G74 571 aa25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 SEC62Q99442 399 aaKnown RBP25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 ATP8A2Q9NTI2 1148 aa25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 MCM9Q9NXL9 1143 aa25.24■■□□□ 1.63
MAP1LC3A-204ENST00000476428 CTNND1O60716 968 aaKnown RBP25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 POLR3DP05423 398 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 TM4SF4P48230 202 aa25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 RRP1BQ14684 758 aaKnown RBP25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 CENPQQ7L2Z9 268 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 SCYL3Q8IZE3 742 aa25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 CRACR2BQ8N4Y2 399 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 RILPL2Q969X0 211 aa25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 DNAJC18Q9H819 358 aa25.23■■□□□ 1.63
MAP1LC3A-204ENST00000476428 MANSC4A6NHS7 340 aaPredicted RBP25.22■■□□□ 1.63
MAP1LC3A-204ENST00000476428 GPAA1O43292 621 aa25.22■■□□□ 1.63
MAP1LC3A-204ENST00000476428 PLCD1P51178 756 aa25.22■■□□□ 1.63
MAP1LC3A-204ENST00000476428 AK9Q5TCS8 1911 aa25.22■■□□□ 1.63
MAP1LC3A-204ENST00000476428 PPATQ06203 517 aa25.21■■□□□ 1.63
MAP1LC3A-204ENST00000476428 TRIM34Q9BYJ4 488 aa25.21■■□□□ 1.63
MAP1LC3A-204ENST00000476428 EHD4Q9H223 541 aa25.21■■□□□ 1.63
MAP1LC3A-204ENST00000476428 CYP2D6P10635 497 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 INHBEP58166 350 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 EVX2Q03828 476 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SREBF2Q12772 1141 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 PPIL2Q13356 520 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TICAM2Q86XR7 235 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CCDC136Q96JN2 1154 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 MS4A4AQ96JQ5 239 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 PICK1Q9NRD5 415 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 RNF186Q9NXI6 227 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SERPINB13Q9UIV8 391 aa25.2■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GSG1L2A8MUP6 293 aa25.19■■□□□ 1.62
MAP1LC3A-204ENST00000476428 IRF6O14896 467 aa25.19■■□□□ 1.62
MAP1LC3A-204ENST00000476428 PTPRAP18433 802 aa25.19■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CAP2P40123 477 aa25.19■■□□□ 1.62
MAP1LC3A-204ENST00000476428 RGS19P49795 217 aa25.19■■□□□ 1.62
MAP1LC3A-204ENST00000476428 OTOFQ9HC10 1997 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 USP17L12C9JPN9 530 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 USP17L21D6R901 530 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GTF2A2P52657 109 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TTC22Q5TAA0 569 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 DDRGK1Q96HY6 314 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 ZHX2Q9Y6X8 837 aa25.18■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CDK5RAP2Q96SN8 1893 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TESPA1A2RU30 521 aaPredicted RBP25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CA12O43570 354 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TRPA1O75762 1119 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GNAT2P19087 354 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GABPAQ06546 454 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 FAM227BQ96M60 508 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 HELLSQ9NRZ9 838 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TSKSQ9UJT2 592 aa25.17■■□□□ 1.62
MAP1LC3A-204ENST00000476428 FOCADQ5VW36 1801 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CYP2D7A0A087X1C5 515 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 PATL2C9JE40 543 aaKnown RBP25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GSPT1P15170 499 aaKnown RBP25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SDSP20132 328 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 JAG1P78504 1218 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 C12orf60Q5U649 245 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 TATDN1Q6P1N9 297 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 GIMAP6Q6P9H5 292 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CTR9Q6PD62 1173 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CCDC84Q86UT8 332 aaPredicted RBP25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 PTPN18Q99952 460 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 KCNH4Q9UQ05 1017 aa25.16■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CCL15-CCL14A0A0B4J2E2 113 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 A0A0D9SFI3 127 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SMIM22K7EJ46 135 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 NMIQ13287 307 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 SNAPC2Q13487 334 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 CCL15Q16663 113 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 IFNL1Q8IU54 200 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 BRI3BPQ8WY22 251 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 EPB41L4AQ9HCS5 686 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 MYH7P12883 1935 aa25.15■■□□□ 1.62
MAP1LC3A-204ENST00000476428 IGF2BP3O00425 579 aaKnown RBP eCLIP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms