RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 MIGA2Q7L4E1 593 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 ERO1BQ86YB8 467 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
CALD1-217ENST00000475772 TLR2O60603 784 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 FRAT2O75474 233 aaPredicted RBP13.09□□□□□ -0.31
CALD1-217ENST00000475772 INPP5BP32019 993 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 HABP4Q5JVS0 413 aaKnown RBP13.09□□□□□ -0.31
CALD1-217ENST00000475772 TATDN2Q93075 761 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 CSADQ9Y600 493 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 PTPRCP08575 1304 aa13.09□□□□□ -0.31
CALD1-217ENST00000475772 EYA2O00167 538 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 MOGSQ13724 837 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 C17orf99Q6UX52 265 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.32
CALD1-217ENST00000475772 ZNF112Q9UJU3 913 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
CALD1-217ENST00000475772 IFIT1P09914 478 aaKnown RBP13.07□□□□□ -0.32
CALD1-217ENST00000475772 CETPP11597 493 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 LACTBP83111 547 aaPredicted RBP13.07□□□□□ -0.32
CALD1-217ENST00000475772 NFIAQ12857 509 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 PPIL2Q13356 520 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 PUM3Q15397 648 aaKnown RBP13.07□□□□□ -0.32
CALD1-217ENST00000475772 CDC42EP5Q6NZY7 148 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 NUDT18Q6ZVK8 323 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
CALD1-217ENST00000475772 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
CALD1-217ENST00000475772 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 SMAPO00193 183 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 PRDX5P30044 214 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 PPATQ06203 517 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 SLFN5Q08AF3 891 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 SNAPC2Q13487 334 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 ZFPM1Q8IX07 1006 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 FAM151AQ8WW52 585 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 LPIN2Q92539 896 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 DAGLAQ9Y4D2 1042 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 SZT2Q5T011 3432 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 ADGRA2Q96PE1 1338 aa13.06□□□□□ -0.32
CALD1-217ENST00000475772 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
CALD1-217ENST00000475772 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
CALD1-217ENST00000475772 TCP10Q12799 353 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 SLC9C1Q4G0N8 1177 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 NBPF11Q86T75 865 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
CALD1-217ENST00000475772 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 KCNH4Q9UQ05 1017 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 MAST3O60307 1309 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
CALD1-217ENST00000475772 MGAMO43451 1857 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 ZMYND10O75800 440 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 SLURP2P0DP57 97 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 SLC5A1P13866 664 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 MTFR1Q15390 333 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 TRMT2AQ8IZ69 625 aaKnown RBP13.04□□□□□ -0.32
CALD1-217ENST00000475772 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
CALD1-217ENST00000475772 E9PSI1 815 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 PDHXO00330 501 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
CALD1-217ENST00000475772 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 NOL9Q5SY16 702 aaKnown RBP13.03□□□□□ -0.32
CALD1-217ENST00000475772 GPAT2Q6NUI2 795 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 ANKRD23Q86SG2 305 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 HOOK2Q96ED9 719 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
CALD1-217ENST00000475772 PTPRFP10586 1907 aa13.02□□□□□ -0.32
CALD1-217ENST00000475772 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 GNRH1P01148 92 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 PSMC4P43686 418 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 PHKA1P46020 1223 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 SH3BP5LQ7L8J4 393 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 SHISA4Q96DD7 197 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 SIL1Q9H173 461 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 PA2G4Q9UQ80 394 aaKnown RBP13.02□□□□□ -0.33
CALD1-217ENST00000475772 ATRNL1Q5VV63 1379 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 PHIPQ8WWQ0 1821 aa13.02□□□□□ -0.33
CALD1-217ENST00000475772 CIAO1O76071 339 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 BCRP11274 1271 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 ADORA1P30542 326 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 PRMT2P55345 433 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 MAP3K10Q02779 954 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 KIF22Q14807 665 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
CALD1-217ENST00000475772 RNF166Q96A37 237 aaPredicted RBP13.01□□□□□ -0.33
CALD1-217ENST00000475772 ZFRQ96KR1 1074 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms