RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CDCA7LQ96GN5 454 aa25.03■■□□□ 1.6
APP-215ENST00000474136 GJD2Q9UKL4 321 aa25.03■■□□□ 1.6
APP-215ENST00000474136 MYH2Q9UKX2 1941 aa25.03■■□□□ 1.6
APP-215ENST00000474136 ANKLE1Q8NAG6 615 aa25.02■■□□□ 1.6
APP-215ENST00000474136 CUL9Q8IWT3 2517 aa25.02■■□□□ 1.6
APP-215ENST00000474136 MROH7-TTC4A0A0A0MT08 1334 aa25.01■■□□□ 1.59
APP-215ENST00000474136 RHBDL3P58872 404 aa25.01■■□□□ 1.59
APP-215ENST00000474136 PROCA1Q8NCQ7 364 aaPredicted RBP25.01■■□□□ 1.59
APP-215ENST00000474136 NBPF3Q9H094 633 aa25.01■■□□□ 1.59
APP-215ENST00000474136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.01■■□□□ 1.59
APP-215ENST00000474136 RPTORQ8N122 1335 aa25■■□□□ 1.59
APP-215ENST00000474136 TBC1D12O60347 775 aa25■■□□□ 1.59
APP-215ENST00000474136 UBTFL1P0CB47 393 aaPredicted RBP25■■□□□ 1.59
APP-215ENST00000474136 IL15P40933 162 aaPredicted RBP25■■□□□ 1.59
APP-215ENST00000474136 MAGEA10P43363 369 aaPredicted RBP25■■□□□ 1.59
APP-215ENST00000474136 HMGCS2P54868 508 aa25■■□□□ 1.59
APP-215ENST00000474136 TIMM10P62072 90 aa25■■□□□ 1.59
APP-215ENST00000474136 RRP1BQ14684 758 aaKnown RBP25■■□□□ 1.59
APP-215ENST00000474136 SLF2Q8IX21 1173 aa25■■□□□ 1.59
APP-215ENST00000474136 ZNF384Q8TF68 577 aa25■■□□□ 1.59
APP-215ENST00000474136 HMX1Q9NP08 348 aaPredicted RBP25■■□□□ 1.59
APP-215ENST00000474136 GCLCP48506 637 aaPredicted RBP24.99■■□□□ 1.59
APP-215ENST00000474136 ZNF280CQ8ND82 737 aa24.99■■□□□ 1.59
APP-215ENST00000474136 ASCC2Q9H1I8 757 aaPredicted RBP24.99■■□□□ 1.59
APP-215ENST00000474136 GPR75-ASB3A0A0A6YYF3 556 aa24.98■■□□□ 1.59
APP-215ENST00000474136 ZBTB22O15209 634 aa24.98■■□□□ 1.59
APP-215ENST00000474136 MECOMQ03112 1051 aa24.98■■□□□ 1.59
APP-215ENST00000474136 GPR153Q6NV75 609 aa24.98■■□□□ 1.59
APP-215ENST00000474136 TRIB2Q92519 343 aa24.98■■□□□ 1.59
APP-215ENST00000474136 OSBPL5Q9H0X9 879 aaPredicted RBP24.98■■□□□ 1.59
APP-215ENST00000474136 C11orf49Q9H6J7 331 aa24.98■■□□□ 1.59
APP-215ENST00000474136 PEX10O60683 326 aa24.97■■□□□ 1.59
APP-215ENST00000474136 SPTY2D1Q68D10 685 aaPredicted RBP24.97■■□□□ 1.59
APP-215ENST00000474136 LRIT3Q3SXY7 679 aa24.96■■□□□ 1.59
APP-215ENST00000474136 ERICH6Q7L0X2 663 aa24.96■■□□□ 1.59
APP-215ENST00000474136 OGDHLQ9ULD0 1010 aa24.96■■□□□ 1.59
APP-215ENST00000474136 PDS5AQ29RF7 1337 aaKnown RBP24.95■■□□□ 1.59
APP-215ENST00000474136 CT47B1P0C2W7 299 aaPredicted RBP24.95■■□□□ 1.58
APP-215ENST00000474136 CYP2B6P20813 491 aa24.95■■□□□ 1.58
APP-215ENST00000474136 TDHQ8IZJ6 230 aa24.95■■□□□ 1.58
APP-215ENST00000474136 MTMR10Q9NXD2 777 aa24.95■■□□□ 1.58
APP-215ENST00000474136 PFASO15067 1338 aa24.95■■□□□ 1.58
APP-215ENST00000474136 CAP2P40123 477 aa24.94■■□□□ 1.58
APP-215ENST00000474136 PABPC4Q13310 644 aaKnown RBP eCLIP24.94■■□□□ 1.58
APP-215ENST00000474136 XAGE2Q96GT9 111 aa24.94■■□□□ 1.58
APP-215ENST00000474136 COPRSQ9NQ92 184 aa24.94■■□□□ 1.58
APP-215ENST00000474136 STXBP5LQ9Y2K9 1186 aa24.94■■□□□ 1.58
APP-215ENST00000474136 A0A1B0GUL7 405 aa24.93■■□□□ 1.58
APP-215ENST00000474136 USP17L5A8MUK1 530 aa24.93■■□□□ 1.58
APP-215ENST00000474136 NPM3O75607 178 aaKnown RBP24.93■■□□□ 1.58
APP-215ENST00000474136 SH3D19Q5HYK7 790 aa24.93■■□□□ 1.58
APP-215ENST00000474136 UBE2OQ9C0C9 1292 aaKnown RBP24.93■■□□□ 1.58
APP-215ENST00000474136 SMC4Q9NTJ3 1288 aa24.93■■□□□ 1.58
APP-215ENST00000474136 MORF4L1Q9UBU8 362 aa24.93■■□□□ 1.58
APP-215ENST00000474136 DDX60LQ5H9U9 1706 aaKnown RBP24.93■■□□□ 1.58
APP-215ENST00000474136 LOC285556D6RIA3 1793 aa24.92■■□□□ 1.58
APP-215ENST00000474136 PRKAR2AP13861 404 aaKnown RBP24.92■■□□□ 1.58
APP-215ENST00000474136 MAP3K21Q5TCX8 1036 aa24.92■■□□□ 1.58
APP-215ENST00000474136 PI16Q6UXB8 463 aa24.92■■□□□ 1.58
APP-215ENST00000474136 TBC1D9Q6ZT07 1266 aa24.92■■□□□ 1.58
APP-215ENST00000474136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.92■■□□□ 1.58
APP-215ENST00000474136 TFCP2Q12800 502 aa24.91■■□□□ 1.58
APP-215ENST00000474136 TBC1D2Q9BYX2 928 aa24.91■■□□□ 1.58
APP-215ENST00000474136 TXNRD2Q9NNW7 524 aa24.91■■□□□ 1.58
APP-215ENST00000474136 HMG20BQ9P0W2 317 aa24.91■■□□□ 1.58
APP-215ENST00000474136 MTMR2Q13614 643 aa24.9■■□□□ 1.58
APP-215ENST00000474136 ALDH1L2Q3SY69 923 aa24.9■■□□□ 1.58
APP-215ENST00000474136 NSUN4Q96CB9 384 aaKnown RBP24.9■■□□□ 1.58
APP-215ENST00000474136 P2RX7Q99572 595 aaKnown RBP24.9■■□□□ 1.58
APP-215ENST00000474136 PLXNB2O15031 1838 aa24.9■■□□□ 1.58
APP-215ENST00000474136 IRX3P78415 501 aaPredicted RBP24.89■■□□□ 1.58
APP-215ENST00000474136 JAG1P78504 1218 aa24.89■■□□□ 1.58
APP-215ENST00000474136 MVPQ14764 893 aaKnown RBP24.89■■□□□ 1.58
APP-215ENST00000474136 MEIS3Q99687 375 aa24.89■■□□□ 1.58
APP-215ENST00000474136 AS3MTQ9HBK9 375 aa24.89■■□□□ 1.58
APP-215ENST00000474136 COL2A1P02458 1487 aaPredicted RBP24.89■■□□□ 1.57
APP-215ENST00000474136 NUDT12Q9BQG2 462 aa24.88■■□□□ 1.57
APP-215ENST00000474136 LDHCP07864 332 aa24.87■■□□□ 1.57
APP-215ENST00000474136 COL6A1P12109 1028 aa24.87■■□□□ 1.57
APP-215ENST00000474136 CACNB2Q08289 660 aaPredicted RBP24.87■■□□□ 1.57
APP-215ENST00000474136 SHROOM1Q2M3G4 852 aaPredicted RBP24.87■■□□□ 1.57
APP-215ENST00000474136 TEX11Q8IYF3 940 aa24.87■■□□□ 1.57
APP-215ENST00000474136 NEUROD6Q96NK8 337 aa24.87■■□□□ 1.57
APP-215ENST00000474136 RAI14Q9P0K7 980 aa24.87■■□□□ 1.57
APP-215ENST00000474136 NOB1Q9ULX3 412 aaKnown RBP24.87■■□□□ 1.57
APP-215ENST00000474136 UNC80Q8N2C7 3258 aa24.87■■□□□ 1.57
APP-215ENST00000474136 CCND3P30281 292 aaPredicted RBP24.86■■□□□ 1.57
APP-215ENST00000474136 BACE1P56817 501 aa24.86■■□□□ 1.57
APP-215ENST00000474136 HERVK_113P62684 666 aa24.86■■□□□ 1.57
APP-215ENST00000474136 GSTO1P78417 241 aa24.86■■□□□ 1.57
APP-215ENST00000474136 MDM2Q00987 491 aaPredicted RBP24.86■■□□□ 1.57
APP-215ENST00000474136 LRRC26Q2I0M4 334 aa24.86■■□□□ 1.57
APP-215ENST00000474136 SPATA5Q8NB90 893 aa24.86■■□□□ 1.57
APP-215ENST00000474136 GPRC5AQ8NFJ5 357 aa24.86■■□□□ 1.57
APP-215ENST00000474136 SH3RF3Q8TEJ3 882 aaPredicted RBP24.86■■□□□ 1.57
APP-215ENST00000474136 WDR18Q9BV38 432 aa24.86■■□□□ 1.57
APP-215ENST00000474136 HERC5Q9UII4 1024 aaKnown RBP24.86■■□□□ 1.57
APP-215ENST00000474136 AKAP2Q9Y2D5 859 aa24.86■■□□□ 1.57
APP-215ENST00000474136 MAP4K4O95819 1239 aaPredicted RBP24.86■■□□□ 1.57
APP-215ENST00000474136 XRCC5P13010 732 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms