RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 TBC1D12O60347 775 aa14.88□□□□□ -0.03
DDX56-209ENST00000473924 MCMDC2Q4G0Z9 681 aa14.88□□□□□ -0.03
DDX56-209ENST00000473924 ZKSCAN4Q969J2 545 aaPredicted RBP14.88□□□□□ -0.03
DDX56-209ENST00000473924 FAM227BQ96M60 508 aa14.88□□□□□ -0.03
DDX56-209ENST00000473924 ELP3Q9H9T3 547 aa14.88□□□□□ -0.03
DDX56-209ENST00000473924 A0A0D9SFI3 127 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 SLC10A3P09131 477 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 SLURP2P0DP57 97 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 INPP5BP32019 993 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 TDO2P48775 406 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 MAP3K10Q02779 954 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 NOGQ13253 232 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 VGLL4Q14135 290 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 CWC27Q6UX04 472 aaKnown RBP14.87□□□□□ -0.03
DDX56-209ENST00000473924 CCDC129Q6ZRS4 1044 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
DDX56-209ENST00000473924 RASAL3Q86YV0 1011 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 NACAP1Q9BZK3 213 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 ZNF112Q9UJU3 913 aa14.87□□□□□ -0.03
DDX56-209ENST00000473924 OTOFQ9HC10 1997 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 GSG1L2A8MUP6 293 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 PATL2C9JE40 543 aaKnown RBP14.86□□□□□ -0.03
DDX56-209ENST00000473924 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 USP17L21D6R901 530 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 AOC2O75106 756 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 PLCD1P51178 756 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 MFAP1P55081 439 aaKnown RBP14.86□□□□□ -0.03
DDX56-209ENST00000473924 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
DDX56-209ENST00000473924 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 EHD4Q9H223 541 aa14.86□□□□□ -0.03
DDX56-209ENST00000473924 PHF20L1A8MW92 1017 aa14.85□□□□□ -0.03
DDX56-209ENST00000473924 FAM155AB1AL88 458 aaPredicted RBP14.85□□□□□ -0.03
DDX56-209ENST00000473924 CTNND1O60716 968 aaKnown RBP14.85□□□□□ -0.03
DDX56-209ENST00000473924 OPTNQ96CV9 577 aa14.85□□□□□ -0.03
DDX56-209ENST00000473924 PICK1Q9NRD5 415 aa14.85□□□□□ -0.03
DDX56-209ENST00000473924 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
DDX56-209ENST00000473924 SNCAIPQ9Y6H5 919 aa14.85□□□□□ -0.03
DDX56-209ENST00000473924 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
DDX56-209ENST00000473924 BAZ2AQ9UIF9 1905 aaKnown RBP14.84□□□□□ -0.03
DDX56-209ENST00000473924 MINDY4BA8MYZ0 360 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 CYP2D6P10635 497 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 MAP2K2P36507 400 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 NOL9Q5SY16 702 aaKnown RBP14.84□□□□□ -0.03
DDX56-209ENST00000473924 C12orf60Q5U649 245 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 SPRYD7Q5W111 196 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 CTR9Q6PD62 1173 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 METTL16Q86W50 562 aaKnown RBP14.84□□□□□ -0.03
DDX56-209ENST00000473924 ERO1BQ86YB8 467 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 IFNL3Q8IZI9 196 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 RUFY2Q8WXA3 655 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 WNK4Q96J92 1243 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 NAPBQ9H115 298 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 SIPA1L1O43166 1804 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 CCDC171Q6TFL3 1326 aa14.84□□□□□ -0.03
DDX56-209ENST00000473924 CYP2D7A0A087X1C5 515 aa14.83□□□□□ -0.04
DDX56-209ENST00000473924 ZBTB48P10074 688 aaPredicted RBP14.83□□□□□ -0.04
DDX56-209ENST00000473924 CAP2P40123 477 aa14.83□□□□□ -0.04
DDX56-209ENST00000473924 KIF23Q02241 960 aaPredicted RBP14.83□□□□□ -0.04
DDX56-209ENST00000473924 ZNF589Q86UQ0 364 aaPredicted RBP14.83□□□□□ -0.04
DDX56-209ENST00000473924 DNAJC18Q9H819 358 aa14.83□□□□□ -0.04
DDX56-209ENST00000473924 EPB41L4AQ9HCS5 686 aaPredicted RBP14.83□□□□□ -0.04
DDX56-209ENST00000473924 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 CHMLP26374 656 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 EVX2Q03828 476 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 SBK1Q52WX2 424 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 VPS53Q5VIR6 699 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 DYNLL2Q96FJ2 89 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 SWAP70Q9UH65 585 aa14.82□□□□□ -0.04
DDX56-209ENST00000473924 DOCK1Q14185 1865 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 CEP350Q5VT06 3117 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 GDF11O95390 407 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 HSPD1P10809 573 aaKnown RBP14.81□□□□□ -0.04
DDX56-209ENST00000473924 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
DDX56-209ENST00000473924 PPATQ06203 517 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 GABPAQ06546 454 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 SREBF2Q12772 1141 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 CERKLQ49MI3 558 aaPredicted RBP14.81□□□□□ -0.04
DDX56-209ENST00000473924 TATDN1Q6P1N9 297 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 JMYQ8N9B5 988 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 ZIC5Q96T25 663 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 BEGAINQ9BUH8 593 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
DDX56-209ENST00000473924 MANSC4A6NHS7 340 aaPredicted RBP14.8□□□□□ -0.04
DDX56-209ENST00000473924 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
DDX56-209ENST00000473924 SLC3A2P08195 630 aaKnown RBP14.8□□□□□ -0.04
DDX56-209ENST00000473924 ASNSP08243 561 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 PTPRAP18433 802 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 SHMT1P34896 483 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 GJA5P36382 358 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 PPIL2Q13356 520 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 RRP1BQ14684 758 aaKnown RBP14.8□□□□□ -0.04
DDX56-209ENST00000473924 IFFO2Q5TF58 517 aa14.8□□□□□ -0.04
DDX56-209ENST00000473924 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
DDX56-209ENST00000473924 SLC44A5Q8NCS7 719 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms