RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 KCNH3Q9ULD8 1083 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 NPHP1O15259 732 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 GRAMD1CQ8IYS0 662 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 MED15Q96RN5 788 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 FEZ1Q99689 392 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 L2HGDHQ9H9P8 463 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 CGNQ9P2M7 1197 aaKnown RBP12.61□□□□□ -0.39
C9orf3-214ENST00000473778 SLC12A7Q9Y666 1083 aa12.61□□□□□ -0.39
C9orf3-214ENST00000473778 MMP1P03956 469 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 BCAMP50895 628 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 UBASH3AP57075 661 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 MYL5Q02045 173 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 FMR1Q06787 632 aaKnown RBP eCLIP12.6□□□□□ -0.39
C9orf3-214ENST00000473778 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 AKNAD1Q5T1N1 836 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 NOSTRINQ8IVI9 506 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 MIGA1Q8NAN2 632 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 TMX1Q9H3N1 280 aa12.6□□□□□ -0.39
C9orf3-214ENST00000473778 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 IFNAR1P17181 557 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 TMEM139Q8IV31 216 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 CNNM3Q8NE01 707 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 ZNF446Q9NWS9 450 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 PCDHB6Q9Y5E3 794 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 MYH6P13533 1939 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 CUTAO60888 179 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 SLU7O95391 586 aaKnown RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
C9orf3-214ENST00000473778 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 CFAP100Q494V2 611 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 TRIM65Q6PJ69 517 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 ERO1AQ96HE7 468 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 OGFRQ9NZT2 677 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 TAF1P21675 1872 aa12.59□□□□□ -0.39
C9orf3-214ENST00000473778 NID2Q14112 1375 aa12.58□□□□□ -0.39
C9orf3-214ENST00000473778 MROH5Q6ZUA9 1318 aa12.58□□□□□ -0.39
C9orf3-214ENST00000473778 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 SERPINC1P01008 464 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 KCNJ6P48051 423 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
C9orf3-214ENST00000473778 VSTM4Q8IW00 320 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 JMYQ8N9B5 988 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-214ENST00000473778 TRIM29Q14134 588 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 REXO1L1PQ8IX06 675 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
C9orf3-214ENST00000473778 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
C9orf3-214ENST00000473778 FBXO41Q8TF61 875 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 MAN1B1Q9UKM7 699 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 STRCQ7RTU9 1775 aa12.58□□□□□ -0.4
C9orf3-214ENST00000473778 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 MYH14Q7Z406 1995 aaKnown RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 BAZ2AQ9UIF9 1905 aaKnown RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 ERVV-1B6SEH8 477 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 WNT7AO00755 349 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 POLR2DO15514 142 aaKnown RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 PTPREP23469 700 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 MAP3K12Q12852 859 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 ZNF397Q8NF99 534 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 STAG1Q8WVM7 1258 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 UTP14AQ9BVJ6 771 aaKnown RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 MORC2Q9Y6X9 1032 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 PHLPP1O60346 1717 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 A0A087X0B3 334 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 SLC5A1P13866 664 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 TPM4P67936 248 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 CRACR2BQ8N4Y2 399 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-214ENST00000473778 PDILTQ8N807 584 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 SERTAD1Q9UHV2 236 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
C9orf3-214ENST00000473778 DOT1LQ8TEK3 1739 aa12.56□□□□□ -0.4
C9orf3-214ENST00000473778 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms