RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 LDLRAD1Q5T700 205 aa22.71■■□□□ 1.23
CTDSP1-207ENST00000473420 MIGA2Q7L4E1 593 aa22.71■■□□□ 1.23
CTDSP1-207ENST00000473420 IFNL3Q8IZI9 196 aa22.71■■□□□ 1.23
CTDSP1-207ENST00000473420 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.71■■□□□ 1.231e-6■□□□□ 9.3
CTDSP1-207ENST00000473420 ZNF112Q9UJU3 913 aa22.71■■□□□ 1.23
CTDSP1-207ENST00000473420 ZMYM6O95789 1325 aa22.71■■□□□ 1.23
CTDSP1-207ENST00000473420 RASSF10A6NK89 507 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 FOXP2O15409 715 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 APPP05067 770 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 TDO2P48775 406 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 C12orf60Q5U649 245 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 CTR9Q6PD62 1173 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 MOB2Q70IA6 237 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 ANKRD13AQ8IZ07 590 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.225e-6■□□□□ 10.3
CTDSP1-207ENST00000473420 SERPINB13Q9UIV8 391 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 FZD1Q9UP38 647 aa22.7■■□□□ 1.22
CTDSP1-207ENST00000473420 LAMA4Q16363 1823 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 USP17L12C9JPN9 530 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 USP17L21D6R901 530 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 UBE2Q2LH0YL09 131 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 CDC45O75419 566 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 HSPD1P10809 573 aaKnown RBP22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 ALX1Q15699 326 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 VPS53Q5VIR6 699 aa22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 CRACR2BQ8N4Y2 399 aaPredicted RBP22.69■■□□□ 1.22
CTDSP1-207ENST00000473420 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 SGSM2O43147 1006 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 PLCD1P51178 756 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 MAP3K9P80192 1104 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 CASC1Q6TDU7 716 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 WRNIP1Q96S55 665 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 NAPBQ9H115 298 aa22.68■■□□□ 1.22
CTDSP1-207ENST00000473420 PHF20L1A8MW92 1017 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 GABPAQ06546 454 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 SLC4A8Q2Y0W8 1093 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 DEFB115Q30KQ5 88 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 DSCC1Q9BVC3 393 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 IL25Q9H293 177 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 DNAJC18Q9H819 358 aa22.67■■□□□ 1.22
CTDSP1-207ENST00000473420 CYP2D6P10635 497 aa22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 NOL9Q5SY16 702 aaKnown RBP22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 RGMBQ6NW40 437 aa22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 SWAP70Q9UH65 585 aa22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 CSADQ9Y600 493 aa22.66■■□□□ 1.22
CTDSP1-207ENST00000473420 FAM196BA6NMK8 535 aa22.65■■□□□ 1.22
CTDSP1-207ENST00000473420 CTNND1O60716 968 aaKnown RBP22.65■■□□□ 1.22
CTDSP1-207ENST00000473420 TATDN1Q6P1N9 297 aa22.65■■□□□ 1.22
CTDSP1-207ENST00000473420 ESYT1Q9BSJ8 1104 aa22.65■■□□□ 1.22
CTDSP1-207ENST00000473420 CYP2D7A0A087X1C5 515 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 SLURP2P0DP57 97 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 HTRA3P83110 453 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 VGLL4Q14135 290 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 C16orf86Q6ZW13 317 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 THSD7BQ9C0I4 1608 aa22.64■■□□□ 1.21
CTDSP1-207ENST00000473420 MINDY4BA8MYZ0 360 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 FGAP02671 866 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 INPP5BP32019 993 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 ZNF157P51786 506 aaPredicted RBP22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 EVX2Q03828 476 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 SCYL3Q8IZE3 742 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 CCDC102AQ96A19 550 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 GINM1Q9NU53 330 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 SNCAIPQ9Y6H5 919 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 PHIPQ8WWQ0 1821 aa22.63■■□□□ 1.21
CTDSP1-207ENST00000473420 SLC10A3P09131 477 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 SHMT1P34896 483 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 CAP2P40123 477 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 ECE1P42892 770 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 PPARAQ07869 468 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 ZKSCAN4Q969J2 545 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 SLC10A4Q96EP9 437 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 CLMNQ96JQ2 1002 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 ANAPC4Q9UJX5 808 aa22.62■■□□□ 1.21
CTDSP1-207ENST00000473420 SLC3A2P08195 630 aaKnown RBP22.61■■□□□ 1.21
CTDSP1-207ENST00000473420 RASAL3Q86YV0 1011 aa22.61■■□□□ 1.21
CTDSP1-207ENST00000473420 DYNLL2Q96FJ2 89 aa22.61■■□□□ 1.21
CTDSP1-207ENST00000473420 SPDYE5A6NIY4 337 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 CDK8P49336 464 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 CAPNS2Q96L46 248 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 ELP3Q9H9T3 547 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 ZNF287Q9HBT7 754 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 CTNNA3Q9UI47 895 aa22.6■■□□□ 1.21
CTDSP1-207ENST00000473420 GREB1LQ9C091 1923 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 FAM155AB1AL88 458 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 SMIM22K7EJ46 135 aa22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 ZBTB48P10074 688 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 RRP1BQ14684 758 aaKnown RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 CERKLQ49MI3 558 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 CYP4F22Q6NT55 531 aa22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 KIAA1211Q6ZU35 1233 aa22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 PAXIP1Q6ZW49 1069 aaPredicted RBP22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 ERO1BQ86YB8 467 aa22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 PICK1Q9NRD5 415 aa22.59■■□□□ 1.21
CTDSP1-207ENST00000473420 ASNSP08243 561 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 PDE4BQ07343 736 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 SLC44A5Q8NCS7 719 aa22.58■■□□□ 1.21
CTDSP1-207ENST00000473420 MAP4K1Q92918 833 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms