RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 PTPRAP18433 802 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 ZAP70P43403 619 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 TEX11Q8IYF3 940 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 PICK1Q9NRD5 415 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 NDUFB9Q9Y6M9 179 aa21.97■■□□□ 1.11
SNX4-204ENST00000473417 PDHXO00330 501 aa21.96■■□□□ 1.11
SNX4-204ENST00000473417 LACTBP83111 547 aaPredicted RBP21.96■■□□□ 1.11
SNX4-204ENST00000473417 ARHGEF6Q15052 776 aa21.96■■□□□ 1.11
SNX4-204ENST00000473417 ADGRA1Q86SQ6 560 aa21.96■■□□□ 1.11
SNX4-204ENST00000473417 SH3RF3Q8TEJ3 882 aaPredicted RBP21.96■■□□□ 1.11
SNX4-204ENST00000473417 NOL10Q9BSC4 688 aaKnown RBP21.96■■□□□ 1.11
SNX4-204ENST00000473417 RWDD1Q9H446 243 aaPredicted RBP21.96■■□□□ 1.11
SNX4-204ENST00000473417 DDX60LQ5H9U9 1706 aaKnown RBP21.95■■□□□ 1.1
SNX4-204ENST00000473417 A0A0G2JLL6 359 aaPredicted RBP21.95■■□□□ 1.1
SNX4-204ENST00000473417 C17orf99Q6UX52 265 aa21.95■■□□□ 1.1
SNX4-204ENST00000473417 PRRT2Q7Z6L0 340 aaPredicted RBP21.95■■□□□ 1.1
SNX4-204ENST00000473417 PIH1D3Q9NQM4 214 aaKnown RBP21.95■■□□□ 1.1
SNX4-204ENST00000473417 AATFQ9NY61 560 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNX4-204ENST00000473417 AFG3L2Q9Y4W6 797 aa21.95■■□□□ 1.1
SNX4-204ENST00000473417 ZHX2Q9Y6X8 837 aa21.95■■□□□ 1.1
SNX4-204ENST00000473417 NAV1Q8NEY1 1877 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 KIAA0100Q14667 2235 aaKnown RBP21.94■■□□□ 1.1
SNX4-204ENST00000473417 FAM196BA6NMK8 535 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 BAG3O95817 575 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 IGHDP01880 384 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 PPP4CP60510 307 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 GPAT2Q6NUI2 795 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 ARMC5Q96C12 935 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 GCC1Q96CN9 775 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 MYH7P12883 1935 aa21.94■■□□□ 1.1
SNX4-204ENST00000473417 PLCG2P16885 1265 aa21.93■■□□□ 1.1
SNX4-204ENST00000473417 ANKRD45Q5TZF3 282 aa21.93■■□□□ 1.1
SNX4-204ENST00000473417 ARHGAP39Q9C0H5 1083 aa21.93■■□□□ 1.1
SNX4-204ENST00000473417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.93■■□□□ 1.1
SNX4-204ENST00000473417 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.93■■□□□ 1.1
SNX4-204ENST00000473417 KIF22Q14807 665 aa21.92■■□□□ 1.1
SNX4-204ENST00000473417 PARK7Q99497 189 aaKnown RBP21.92■■□□□ 1.1
SNX4-204ENST00000473417 BOLA2Q9H3K6 86 aa21.92■■□□□ 1.1
SNX4-204ENST00000473417 ANTXR1Q9H6X2 564 aa21.92■■□□□ 1.1
SNX4-204ENST00000473417 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
SNX4-204ENST00000473417 CPA4Q9UI42 421 aa21.92■■□□□ 1.1
SNX4-204ENST00000473417 PTCH2Q9Y6C5 1203 aa21.92■■□□□ 1.1
SNX4-204ENST00000473417 FLT1P17948 1338 aa21.91■■□□□ 1.1
SNX4-204ENST00000473417 MKI67P46013 3256 aaKnown RBP21.91■■□□□ 1.1
SNX4-204ENST00000473417 FASTKD5Q7L8L6 764 aaKnown RBP21.91■■□□□ 1.1
SNX4-204ENST00000473417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.91■■□□□ 1.1
SNX4-204ENST00000473417 DNAJC2Q99543 621 aaKnown RBP21.91■■□□□ 1.1
SNX4-204ENST00000473417 HERC5Q9UII4 1024 aaKnown RBP21.91■■□□□ 1.1
SNX4-204ENST00000473417 GNRH1P01148 92 aa21.9■■□□□ 1.1
SNX4-204ENST00000473417 ATP5JP18859 108 aa21.9■■□□□ 1.1
SNX4-204ENST00000473417 CCDC84Q86UT8 332 aaPredicted RBP21.9■■□□□ 1.1
SNX4-204ENST00000473417 TGFBRAP1Q8WUH2 860 aa21.9■■□□□ 1.1
SNX4-204ENST00000473417 DHX36Q9H2U1 1008 aaKnown RBP21.9■■□□□ 1.1
SNX4-204ENST00000473417 ECHDC1Q9NTX5 307 aa21.9■■□□□ 1.1
SNX4-204ENST00000473417 TRIM75PA6NK02 468 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 IDH1O75874 414 aaKnown RBP21.89■■□□□ 1.09
SNX4-204ENST00000473417 SLC34A2O95436 690 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 CTGFP29279 349 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 CAP2P40123 477 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 GADL1Q6ZQY3 521 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 MAPKAPK5Q8IW41 473 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 ZNF333Q96JL9 665 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 PI4KBQ9UBF8 816 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 SLC45A1Q9Y2W3 748 aa21.89■■□□□ 1.09
SNX4-204ENST00000473417 POTEFA5A3E0 1075 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 GOLIM4O00461 696 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 CYP2C8P10632 490 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 BCRP11274 1271 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 CYP7A1P22680 504 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 PRMT2P55345 433 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 RRP1BQ14684 758 aaKnown RBP21.88■■□□□ 1.09
SNX4-204ENST00000473417 SLC9C1Q4G0N8 1177 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 PRPF38BQ5VTL8 546 aaKnown RBP21.88■■□□□ 1.09
SNX4-204ENST00000473417 TSHZ3Q63HK5 1081 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 SMC5Q8IY18 1101 aa21.88■■□□□ 1.09
SNX4-204ENST00000473417 OTUD7AQ8TE49 926 aaPredicted RBP21.88■■□□□ 1.09
SNX4-204ENST00000473417 EDC3Q96F86 508 aaKnown RBP21.88■■□□□ 1.09
SNX4-204ENST00000473417 MYH8P13535 1937 aa21.87■■□□□ 1.09
SNX4-204ENST00000473417 DYNLL1P63167 89 aaKnown RBP21.87■■□□□ 1.09
SNX4-204ENST00000473417 TMED8Q6PL24 325 aaPredicted RBP21.87■■□□□ 1.09
SNX4-204ENST00000473417 METTL16Q86W50 562 aaKnown RBP21.87■■□□□ 1.09
SNX4-204ENST00000473417 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
SNX4-204ENST00000473417 TRIM47Q96LD4 638 aa21.87■■□□□ 1.09
SNX4-204ENST00000473417 TBC1D2Q9BYX2 928 aa21.87■■□□□ 1.09
SNX4-204ENST00000473417 DNAJC18Q9H819 358 aa21.87■■□□□ 1.09
SNX4-204ENST00000473417 DOCK3Q8IZD9 2030 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 PSMC4P43686 418 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 TTF1Q15361 905 aaPredicted RBP21.86■■□□□ 1.09
SNX4-204ENST00000473417 CERS3Q8IU89 383 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 MAGEB6Q8N7X4 407 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 HAUS7Q99871 368 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 AGTPBP1Q9UPW5 1226 aa21.86■■□□□ 1.09
SNX4-204ENST00000473417 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
SNX4-204ENST00000473417 MAP3K12Q12852 859 aa21.85■■□□□ 1.09
SNX4-204ENST00000473417 NBPF11Q86T75 865 aa21.85■■□□□ 1.09
SNX4-204ENST00000473417 PROCA1Q8NCQ7 364 aaPredicted RBP21.85■■□□□ 1.09
SNX4-204ENST00000473417 ZNF280CQ8ND82 737 aa21.85■■□□□ 1.09
SNX4-204ENST00000473417 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
SNX4-204ENST00000473417 PAG1Q9NWQ8 432 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms