RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 IFFO2Q5TF58 517 aa24.91■■□□□ 1.58
TOP3A-204ENST00000472959 AMOTL1Q8IY63 956 aa24.91■■□□□ 1.58
TOP3A-204ENST00000472959 CRACR2BQ8N4Y2 399 aaPredicted RBP24.91■■□□□ 1.58
TOP3A-204ENST00000472959 CLMNQ96JQ2 1002 aa24.91■■□□□ 1.58
TOP3A-204ENST00000472959 TRIM34Q9BYJ4 488 aa24.91■■□□□ 1.58
TOP3A-204ENST00000472959 A0A0D9SFI3 127 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 FAM155AB1AL88 458 aaPredicted RBP24.9■■□□□ 1.58
TOP3A-204ENST00000472959 NOGQ13253 232 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 SKAP1Q86WV1 359 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 RASAL3Q86YV0 1011 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 NACAP1Q9BZK3 213 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 SERPINB13Q9UIV8 391 aa24.9■■□□□ 1.58
TOP3A-204ENST00000472959 FOCADQ5VW36 1801 aa24.89■■□□□ 1.58
TOP3A-204ENST00000472959 CTNND1O60716 968 aaKnown RBP24.89■■□□□ 1.58
TOP3A-204ENST00000472959 APPP05067 770 aa24.89■■□□□ 1.58
TOP3A-204ENST00000472959 MAP2K2P36507 400 aa24.89■■□□□ 1.58
TOP3A-204ENST00000472959 MFAP1P55081 439 aaKnown RBP24.89■■□□□ 1.58
TOP3A-204ENST00000472959 GRM1Q13255 1194 aa24.89■■□□□ 1.58
TOP3A-204ENST00000472959 BMP2KLQ5H9B9 411 aa24.89■■□□□ 1.58
TOP3A-204ENST00000472959 NOL9Q5SY16 702 aaKnown RBP24.89■■□□□ 1.58
TOP3A-204ENST00000472959 ZKSCAN4Q969J2 545 aaPredicted RBP24.89■■□□□ 1.58
TOP3A-204ENST00000472959 USP17L12C9JPN9 530 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 USP17L21D6R901 530 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 INPP5BP32019 993 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 PLCD1P51178 756 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 SLC4A8Q2Y0W8 1093 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 ELP3Q9H9T3 547 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 ARPP21Q9UBL0 812 aaPredicted RBP24.88■■□□□ 1.57
TOP3A-204ENST00000472959 CEP350Q5VT06 3117 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 AK9Q5TCS8 1911 aa24.88■■□□□ 1.57
TOP3A-204ENST00000472959 FAM196BA6NMK8 535 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 SLURP2P0DP57 97 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 SBK1Q52WX2 424 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 C12orf60Q5U649 245 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 SPRYD7Q5W111 196 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 CWC27Q6UX04 472 aaKnown RBP24.87■■□□□ 1.57
TOP3A-204ENST00000472959 CCDC129Q6ZRS4 1044 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 SNCAIPQ9Y6H5 919 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 CDK5RAP2Q96SN8 1893 aa24.87■■□□□ 1.57
TOP3A-204ENST00000472959 ZBTB48P10074 688 aaPredicted RBP24.86■■□□□ 1.57
TOP3A-204ENST00000472959 CTR9Q6PD62 1173 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 ERO1BQ86YB8 467 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 SCYL3Q8IZE3 742 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 IFNL3Q8IZI9 196 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 WNK4Q96J92 1243 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 DNAJC18Q9H819 358 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 CCDC171Q6TFL3 1326 aa24.86■■□□□ 1.57
TOP3A-204ENST00000472959 SPDYE5A6NIY4 337 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 CHMLP26374 656 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 TDO2P48775 406 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 GABPAQ06546 454 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 JMYQ8N9B5 988 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 RUFY2Q8WXA3 655 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 EPB41L4AQ9HCS5 686 aaPredicted RBP24.85■■□□□ 1.57
TOP3A-204ENST00000472959 PICK1Q9NRD5 415 aa24.85■■□□□ 1.57
TOP3A-204ENST00000472959 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.85■■□□□ 1.57
TOP3A-204ENST00000472959 AOC2O75106 756 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 CYP2D6P10635 497 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 CAP2P40123 477 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 TATDN1Q6P1N9 297 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 ZNF589Q86UQ0 364 aaPredicted RBP24.84■■□□□ 1.57
TOP3A-204ENST00000472959 REM2Q8IYK8 340 aaPredicted RBP24.84■■□□□ 1.57
TOP3A-204ENST00000472959 OPTNQ96CV9 577 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 GINM1Q9NU53 330 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 SWAP70Q9UH65 585 aa24.84■■□□□ 1.57
TOP3A-204ENST00000472959 PPATQ06203 517 aa24.83■■□□□ 1.57
TOP3A-204ENST00000472959 ALX1Q15699 326 aa24.83■■□□□ 1.57
TOP3A-204ENST00000472959 NAPBQ9H115 298 aa24.83■■□□□ 1.57
TOP3A-204ENST00000472959 CYP2D7A0A087X1C5 515 aa24.82■■□□□ 1.56
TOP3A-204ENST00000472959 FOXP2O15409 715 aa24.82■■□□□ 1.56
TOP3A-204ENST00000472959 KIF23Q02241 960 aaPredicted RBP24.82■■□□□ 1.56
TOP3A-204ENST00000472959 DDX60LQ5H9U9 1706 aaKnown RBP24.82■■□□□ 1.56
TOP3A-204ENST00000472959 RAD50Q92878 1312 aa24.82■■□□□ 1.56
TOP3A-204ENST00000472959 MYH1P12882 1939 aa24.81■■□□□ 1.56
TOP3A-204ENST00000472959 HSPD1P10809 573 aaKnown RBP24.81■■□□□ 1.56
TOP3A-204ENST00000472959 PPIL2Q13356 520 aa24.81■■□□□ 1.56
TOP3A-204ENST00000472959 RRP1BQ14684 758 aaKnown RBP24.81■■□□□ 1.56
TOP3A-204ENST00000472959 VPS53Q5VIR6 699 aa24.81■■□□□ 1.56
TOP3A-204ENST00000472959 NAV1Q8NEY1 1877 aa24.81■■□□□ 1.56
TOP3A-204ENST00000472959 MINDY4BA8MYZ0 360 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 ASNSP08243 561 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 PTPRAP18433 802 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 SHMT1P34896 483 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 GJA5P36382 358 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 MAP2K1Q02750 393 aaPredicted RBP24.8■■□□□ 1.56
TOP3A-204ENST00000472959 EVX2Q03828 476 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 MKRN3Q13064 507 aaKnown RBP24.8■■□□□ 1.56
TOP3A-204ENST00000472959 CERKLQ49MI3 558 aaPredicted RBP24.8■■□□□ 1.56
TOP3A-204ENST00000472959 C16orf86Q6ZW13 317 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 CNKSR2Q8WXI2 1034 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 OTUD5Q96G74 571 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 ZIC5Q96T25 663 aa24.8■■□□□ 1.56
TOP3A-204ENST00000472959 MANSC4A6NHS7 340 aaPredicted RBP24.79■■□□□ 1.56
TOP3A-204ENST00000472959 INHBEP58166 350 aa24.79■■□□□ 1.56
TOP3A-204ENST00000472959 DYNLL2Q96FJ2 89 aa24.79■■□□□ 1.56
TOP3A-204ENST00000472959 TBC1D2Q9BYX2 928 aa24.79■■□□□ 1.56
TOP3A-204ENST00000472959 ZMYM6O95789 1325 aa24.79■■□□□ 1.56
TOP3A-204ENST00000472959 SIPA1L1O43166 1804 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 FGAP02671 866 aa24.78■■□□□ 1.56
TOP3A-204ENST00000472959 SLC3A2P08195 630 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms