RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PICK1Q9NRD5 415 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.07□□□□□ -0.16
COL4A3-205ENST00000471862 ZHX2Q9Y6X8 837 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 FLT1P17948 1338 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 CENPFP49454 3210 aa14.07□□□□□ -0.16
COL4A3-205ENST00000471862 TNRC18O15417 2968 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 RAB11FIP3O75154 756 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 IDH1O75874 414 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 CYP7A1P22680 504 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 DYNLL1P63167 89 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 MAPKAPK5Q8IW41 473 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 CLASRPQ8N2M8 674 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 TGFBRAP1Q8WUH2 860 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 DHX36Q9H2U1 1008 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 DNAJC18Q9H819 358 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
COL4A3-205ENST00000471862 HERC5Q9UII4 1024 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 DDX60LQ5H9U9 1706 aaKnown RBP14.06□□□□□ -0.16
COL4A3-205ENST00000471862 CAP2P40123 477 aa14.05□□□□□ -0.16
COL4A3-205ENST00000471862 LACTBP83111 547 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-205ENST00000471862 CCDC84Q86UT8 332 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-205ENST00000471862 ARMC5Q96C12 935 aa14.05□□□□□ -0.16
COL4A3-205ENST00000471862 ARHGAP39Q9C0H5 1083 aa14.05□□□□□ -0.16
COL4A3-205ENST00000471862 KIAA0100Q14667 2235 aaKnown RBP14.05□□□□□ -0.16
COL4A3-205ENST00000471862 MGAMO43451 1857 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 APBB1O00213 710 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 BCRP11274 1271 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 CTGFP29279 349 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 ARHGEF6Q15052 776 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 FASTKD5Q7L8L6 764 aaKnown RBP14.04□□□□□ -0.16
COL4A3-205ENST00000471862 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 MAGEB6Q8N7X4 407 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 CPA4Q9UI42 421 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
COL4A3-205ENST00000471862 MAP3K12Q12852 859 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
COL4A3-205ENST00000471862 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 PARK7Q99497 189 aaKnown RBP14.03□□□□□ -0.16
COL4A3-205ENST00000471862 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
COL4A3-205ENST00000471862 TBC1D2Q9BYX2 928 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 PALD1Q9ULE6 856 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 PTCH2Q9Y6C5 1203 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 PDE4DIPQ5VU43 2346 aa14.03□□□□□ -0.16
COL4A3-205ENST00000471862 MYH7P12883 1935 aa14.02□□□□□ -0.16
COL4A3-205ENST00000471862 NAV1Q8NEY1 1877 aa14.02□□□□□ -0.16
COL4A3-205ENST00000471862 TRIM75PA6NK02 468 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 IFIT2P09913 472 aaKnown RBP14.02□□□□□ -0.17
COL4A3-205ENST00000471862 CYP2C8P10632 490 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 JAG1P78504 1218 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 GADL1Q6ZQY3 521 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 FOXP4Q8IVH2 680 aaPredicted RBP14.02□□□□□ -0.17
COL4A3-205ENST00000471862 AGTPBP1Q9UPW5 1226 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 BRCA2P51587 3418 aa14.02□□□□□ -0.17
COL4A3-205ENST00000471862 TCRBV5S4A2TA0A5A2 114 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 USP17L5A8MUK1 530 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 GNRH1P01148 92 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 PDE6AP16499 860 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 PRMT2P55345 433 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 SPP2Q13103 211 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 KIF22Q14807 665 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 SH3D19Q5HYK7 790 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 PROCA1Q8NCQ7 364 aaPredicted RBP14.01□□□□□ -0.17
COL4A3-205ENST00000471862 ZNF280CQ8ND82 737 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 ZNF333Q96JL9 665 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
COL4A3-205ENST00000471862 SAP30BPQ9UHR5 308 aaKnown RBP14.01□□□□□ -0.17
COL4A3-205ENST00000471862 GOLIM4O00461 696 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 HLA-DOAP06340 250 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 ATP5JP18859 108 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 PSMC4P43686 418 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 SHROOM1Q2M3G4 852 aaPredicted RBP14□□□□□ -0.17
COL4A3-205ENST00000471862 TREML2Q5T2D2 321 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 EDC3Q96F86 508 aaKnown RBP14□□□□□ -0.17
COL4A3-205ENST00000471862 DNAJC2Q99543 621 aaKnown RBP14□□□□□ -0.17
COL4A3-205ENST00000471862 WDR18Q9BV38 432 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 GINM1Q9NU53 330 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 DOCK3Q8IZD9 2030 aa14□□□□□ -0.17
COL4A3-205ENST00000471862 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 ASNSP08243 561 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 OSBPP22059 807 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 USP5P45974 858 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 SLC9C2Q5TAH2 1124 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 LRRCC1Q9C099 1032 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 EHD4Q9H223 541 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 BOLA2Q9H3K6 86 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 SRRDQ9UH36 339 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
COL4A3-205ENST00000471862 ZNF532Q9HCE3 1301 aa13.98□□□□□ -0.17
COL4A3-205ENST00000471862 MKI67P46013 3256 aaKnown RBP13.98□□□□□ -0.17
COL4A3-205ENST00000471862 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
COL4A3-205ENST00000471862 GDF11O95390 407 aa13.98□□□□□ -0.17
COL4A3-205ENST00000471862 HMGCS2P54868 508 aa13.98□□□□□ -0.17
COL4A3-205ENST00000471862 SLC9C1Q4G0N8 1177 aa13.98□□□□□ -0.17
COL4A3-205ENST00000471862 CRACR2BQ8N4Y2 399 aaPredicted RBP13.98□□□□□ -0.17
COL4A3-205ENST00000471862 HAUS7Q99871 368 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms