RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 RRP1BQ14684 758 aaKnown RBP24.59■■□□□ 1.53
CCDC78-208ENST00000471861 Q7L0L9 218 aa24.59■■□□□ 1.53
CCDC78-208ENST00000471861 CUL9Q8IWT3 2517 aa24.58■■□□□ 1.53
CCDC78-208ENST00000471861 GPR75-ASB3A0A0A6YYF3 556 aa24.58■■□□□ 1.53
CCDC78-208ENST00000471861 UBTFL1P0CB47 393 aaPredicted RBP24.58■■□□□ 1.53
CCDC78-208ENST00000471861 SYN1P17600 705 aa24.58■■□□□ 1.53
CCDC78-208ENST00000471861 HMGCS2P54868 508 aa24.58■■□□□ 1.53
CCDC78-208ENST00000471861 SPP2Q13103 211 aa24.58■■□□□ 1.53
CCDC78-208ENST00000471861 COL2A1P02458 1487 aaPredicted RBP24.58■■□□□ 1.52
CCDC78-208ENST00000471861 MECOMQ03112 1051 aa24.57■■□□□ 1.52
CCDC78-208ENST00000471861 GPR153Q6NV75 609 aa24.57■■□□□ 1.52
CCDC78-208ENST00000471861 OSBPL5Q9H0X9 879 aaPredicted RBP24.57■■□□□ 1.52
CCDC78-208ENST00000471861 ASCC2Q9H1I8 757 aaPredicted RBP24.57■■□□□ 1.52
CCDC78-208ENST00000471861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.57■■□□□ 1.52
CCDC78-208ENST00000471861 RPTORQ8N122 1335 aa24.57■■□□□ 1.52
CCDC78-208ENST00000471861 MAGEA10P43363 369 aaPredicted RBP24.56■■□□□ 1.52
CCDC78-208ENST00000471861 GCLCP48506 637 aaPredicted RBP24.56■■□□□ 1.52
CCDC78-208ENST00000471861 TIMM10P62072 90 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 SLF2Q8IX21 1173 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 DEFB123Q8N688 67 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 ZNF280CQ8ND82 737 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 TRIB2Q92519 343 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 NBPF3Q9H094 633 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 COPRSQ9NQ92 184 aa24.56■■□□□ 1.52
CCDC78-208ENST00000471861 NPM3O75607 178 aaKnown RBP24.55■■□□□ 1.52
CCDC78-208ENST00000471861 LRIT3Q3SXY7 679 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 C11orf49Q9H6J7 331 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 HMX1Q9NP08 348 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-208ENST00000471861 OGDHLQ9ULD0 1010 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-208ENST00000471861 SIPA1L1O43166 1804 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 PFASO15067 1338 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 UNC80Q8N2C7 3258 aa24.55■■□□□ 1.52
CCDC78-208ENST00000471861 PEX10O60683 326 aa24.54■■□□□ 1.52
CCDC78-208ENST00000471861 A0A1B0GUL7 405 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 CAP2P40123 477 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 SH3D19Q5HYK7 790 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 MAP3K21Q5TCX8 1036 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 SPTY2D1Q68D10 685 aaPredicted RBP24.53■■□□□ 1.52
CCDC78-208ENST00000471861 PI16Q6UXB8 463 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 XAGE2Q96GT9 111 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 MORF4L1Q9UBU8 362 aa24.53■■□□□ 1.52
CCDC78-208ENST00000471861 E9PSI1 815 aa24.52■■□□□ 1.52
CCDC78-208ENST00000471861 ALDH1L2Q3SY69 923 aa24.52■■□□□ 1.52
CCDC78-208ENST00000471861 ERICH6Q7L0X2 663 aa24.52■■□□□ 1.52
CCDC78-208ENST00000471861 TDHQ8IZJ6 230 aa24.52■■□□□ 1.52
CCDC78-208ENST00000471861 NSUN4Q96CB9 384 aaKnown RBP24.52■■□□□ 1.52
CCDC78-208ENST00000471861 SMC4Q9NTJ3 1288 aa24.52■■□□□ 1.52
CCDC78-208ENST00000471861 PABPC4Q13310 644 aaKnown RBP eCLIP24.51■■□□□ 1.51
CCDC78-208ENST00000471861 TBC1D2Q9BYX2 928 aa24.51■■□□□ 1.51
CCDC78-208ENST00000471861 MTMR10Q9NXD2 777 aa24.51■■□□□ 1.51
CCDC78-208ENST00000471861 HMG20BQ9P0W2 317 aa24.51■■□□□ 1.51
CCDC78-208ENST00000471861 STXBP5LQ9Y2K9 1186 aa24.51■■□□□ 1.51
CCDC78-208ENST00000471861 USP17L5A8MUK1 530 aa24.5■■□□□ 1.51
CCDC78-208ENST00000471861 SLFN5Q08AF3 891 aa24.5■■□□□ 1.51
CCDC78-208ENST00000471861 TFCP2Q12800 502 aa24.5■■□□□ 1.51
CCDC78-208ENST00000471861 MEIS3Q99687 375 aa24.5■■□□□ 1.51
CCDC78-208ENST00000471861 TXNRD2Q9NNW7 524 aa24.5■■□□□ 1.51
CCDC78-208ENST00000471861 PRKAR2AP13861 404 aaKnown RBP24.49■■□□□ 1.51
CCDC78-208ENST00000471861 CYP2B6P20813 491 aa24.49■■□□□ 1.51
CCDC78-208ENST00000471861 JAG1P78504 1218 aa24.49■■□□□ 1.51
CCDC78-208ENST00000471861 TBC1D9Q6ZT07 1266 aa24.49■■□□□ 1.51
CCDC78-208ENST00000471861 COL6A1P12109 1028 aa24.48■■□□□ 1.51
CCDC78-208ENST00000471861 MTMR2Q13614 643 aa24.48■■□□□ 1.51
CCDC78-208ENST00000471861 MVPQ14764 893 aaKnown RBP24.48■■□□□ 1.51
CCDC78-208ENST00000471861 SHROOM1Q2M3G4 852 aaPredicted RBP24.48■■□□□ 1.51
CCDC78-208ENST00000471861 UBE2OQ9C0C9 1292 aaKnown RBP24.47■■□□□ 1.51
CCDC78-208ENST00000471861 DNAJC18Q9H819 358 aa24.47■■□□□ 1.51
CCDC78-208ENST00000471861 MAP4K4O95819 1239 aaPredicted RBP24.46■■□□□ 1.51
CCDC78-208ENST00000471861 SPATA5Q8NB90 893 aa24.46■■□□□ 1.51
CCDC78-208ENST00000471861 CDCA7LQ96GN5 454 aa24.46■■□□□ 1.51
CCDC78-208ENST00000471861 P2RX7Q99572 595 aaKnown RBP24.46■■□□□ 1.51
CCDC78-208ENST00000471861 WDR18Q9BV38 432 aa24.46■■□□□ 1.51
CCDC78-208ENST00000471861 HERC5Q9UII4 1024 aaKnown RBP24.46■■□□□ 1.51
CCDC78-208ENST00000471861 NOB1Q9ULX3 412 aaKnown RBP24.46■■□□□ 1.51
CCDC78-208ENST00000471861 HOXA7P31268 230 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-208ENST00000471861 BACE1P56817 501 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 IRX3P78415 501 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-208ENST00000471861 CACNB2Q08289 660 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-208ENST00000471861 POTEEQ6S8J3 1075 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 TEX11Q8IYF3 940 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 SH3RF3Q8TEJ3 882 aaPredicted RBP24.45■■□□□ 1.5
CCDC78-208ENST00000471861 SOCS4Q8WXH5 440 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 USP6NLQ92738 828 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 AS3MTQ9HBK9 375 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 AKAP2Q9Y2D5 859 aa24.45■■□□□ 1.5
CCDC78-208ENST00000471861 XRCC5P13010 732 aaKnown RBP24.44■■□□□ 1.5
CCDC78-208ENST00000471861 ARID4AP29374 1257 aaPredicted RBP24.44■■□□□ 1.5
CCDC78-208ENST00000471861 HERVK_113P62684 666 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 GSTO1P78417 241 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 CCL14Q16627 93 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 LRRC26Q2I0M4 334 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 LHX8Q68G74 356 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 NUDT12Q9BQG2 462 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 PORCNQ9H237 461 aa24.44■■□□□ 1.5
CCDC78-208ENST00000471861 LAMA2P24043 3122 aaKnown RBP24.44■■□□□ 1.5
CCDC78-208ENST00000471861 LDHCP07864 332 aa24.43■■□□□ 1.5
CCDC78-208ENST00000471861 CCND3P30281 292 aaPredicted RBP24.43■■□□□ 1.5
CCDC78-208ENST00000471861 MCAMP43121 646 aa24.43■■□□□ 1.5
CCDC78-208ENST00000471861 RAI14Q9P0K7 980 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms