RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 ARFGEF2Q9Y6D5 1785 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 NHSQ6T4R5 1651 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 CAMTA2O94983 1202 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 RHOQP17081 205 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 RFX5P48382 616 aaPredicted RBP7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 FAM182BQ5T319 152 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 LMBR1LQ6UX01 489 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 IQSEC3Q9UPP2 1182 aaPredicted RBP7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 SALL3Q9BXA9 1300 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 RREB1Q92766 1687 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 NUP188Q5SRE5 1749 aa7.44□□□□□ -1.22
SMNDC1-204ENST00000471297 KAT6BQ8WYB5 2073 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 ERC2O15083 957 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 PDE8AO60658 829 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 CIAO1O76071 339 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 CSF1RP07333 972 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 MX1P20591 662 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 ANP32AP39687 249 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 PHKA2P46019 1235 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 FOXK2Q01167 660 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 PTPN12Q05209 780 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 TBCELQ5QJ74 424 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 CASC1Q6TDU7 716 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 PTF1AQ7RTS3 328 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 TAS1R3Q7RTX0 852 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 RHBDD1Q8TEB9 315 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 GPATCH3Q96I76 525 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 UTP14AQ9BVJ6 771 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 NIFKQ9BYG3 293 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 TSPAN10Q9H1Z9 355 aaPredicted RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 NARFQ9UHQ1 456 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 TRMT112Q9UI30 125 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 PA2G4Q9UQ80 394 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 CHMP3Q9Y3E7 222 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 TTC41PQ6P2S7 1318 aa7.43□□□□□ -1.22
SMNDC1-204ENST00000471297 IRS4O14654 1257 aaPredicted RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 CDC45O75419 566 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 IFIT2P09913 472 aaKnown RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 GPTP24298 496 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 SWI5Q1ZZU3 235 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 CCDC57Q2TAC2 916 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 SUSD4Q5VX71 490 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 OTUD7AQ8TE49 926 aaPredicted RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 FAM89AQ96GI7 184 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 IL1RAPL2Q9NP60 686 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 AFDNP55196 1824 aaKnown RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 SH3TC1Q8TE82 1336 aa7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 USP42Q9H9J4 1324 aaKnown RBP7.42□□□□□ -1.22
SMNDC1-204ENST00000471297 ANKRD18BA2A2Z9 1011 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 TMEM88BA6NKF7 163 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 EYA2O00167 538 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 PLSCR1O15162 318 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 GLRX3O76003 335 aaKnown RBP7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 SASH1O94885 1247 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 TRIM37O94972 964 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 GSPT1P15170 499 aaKnown RBP7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 SDSP20132 328 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 IL15P40933 162 aaPredicted RBP7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 CTSWP56202 376 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 PTSQ03393 145 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 IFIT5Q13325 482 aaKnown RBP7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 PRIMPOLQ96LW4 560 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 BCL11AQ9H165 835 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 GPR108Q9NPR9 543 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 ECHDC1Q9NTX5 307 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 NIP7Q9Y221 180 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 BTAF1O14981 1849 aa7.41□□□□□ -1.22
SMNDC1-204ENST00000471297 C21orf2O43822 256 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 NOS2P35228 1153 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 KCNQ4P56696 695 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 TEAD4Q15561 434 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 TAF7LQ5H9L4 462 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 AACSQ86V21 672 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 CNTROBQ8N137 903 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 KLHDC4Q8TBB5 520 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 NYXQ9GZU5 481 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 SIL1Q9H173 461 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 TIMMDC1Q9NPL8 285 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 UBN2Q6ZU65 1347 aa7.4□□□□□ -1.22
SMNDC1-204ENST00000471297 COL5A3P25940 1745 aaPredicted RBP7.4□□□□□ -1.23
SMNDC1-204ENST00000471297 SBF2Q86WG5 1849 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 SLC35F4A4IF30 521 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 PPP1R12BO60237 982 aaPredicted RBP7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 PRMT3O60678 531 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 NTSR2O95665 410 aa7.39□□□□□ -1.23
SMNDC1-204ENST00000471297 WEE1P30291 646 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms