RNA–Protein interactions for RNA: ENST00000471060.1

RNF144A-206, Transcript of ring finger protein 144A, humanhuman

TSL 5

Gene RNF144A, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-206ENST00000471060 TBC1D12O60347 775 aa17.03■□□□□ 0.32
RNF144A-206ENST00000471060 CACNB2Q08289 660 aaPredicted RBP17.03■□□□□ 0.32
RNF144A-206ENST00000471060 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
RNF144A-206ENST00000471060 PRKAG2Q9UGJ0 569 aa17.03■□□□□ 0.32
RNF144A-206ENST00000471060 GAKO14976 1311 aa17.02■□□□□ 0.32
RNF144A-206ENST00000471060 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
RNF144A-206ENST00000471060 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
RNF144A-206ENST00000471060 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
RNF144A-206ENST00000471060 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
RNF144A-206ENST00000471060 CDH23Q9H251 3354 aa17.02■□□□□ 0.32
RNF144A-206ENST00000471060 MAST2Q6P0Q8 1798 aa17.02■□□□□ 0.31
RNF144A-206ENST00000471060 TNFRSF10AO00220 468 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
RNF144A-206ENST00000471060 FOSL2P15408 326 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 HMGCS2P54868 508 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
RNF144A-206ENST00000471060 SPP2Q13103 211 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
RNF144A-206ENST00000471060 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 TJAP1Q5JTD0 557 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
RNF144A-206ENST00000471060 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
RNF144A-206ENST00000471060 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.01■□□□□ 0.31
RNF144A-206ENST00000471060 DNAH12Q6ZR08 3092 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 MAPK4P31152 587 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 CCDC84Q86UT8 332 aaPredicted RBP17■□□□□ 0.31
RNF144A-206ENST00000471060 SLF2Q8IX21 1173 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
RNF144A-206ENST00000471060 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 MYLIPQ8WY64 445 aa17■□□□□ 0.31
RNF144A-206ENST00000471060 SEMA3EO15041 775 aa16.99■□□□□ 0.31
RNF144A-206ENST00000471060 ZBTB22O15209 634 aa16.99■□□□□ 0.31
RNF144A-206ENST00000471060 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
RNF144A-206ENST00000471060 RGS2P41220 211 aa16.99■□□□□ 0.31
RNF144A-206ENST00000471060 IRX3P78415 501 aaPredicted RBP16.99■□□□□ 0.31
RNF144A-206ENST00000471060 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
RNF144A-206ENST00000471060 USP6NLQ92738 828 aa16.99■□□□□ 0.31
RNF144A-206ENST00000471060 SENP6Q9GZR1 1112 aaPredicted RBP16.99■□□□□ 0.31
RNF144A-206ENST00000471060 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
RNF144A-206ENST00000471060 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
RNF144A-206ENST00000471060 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
RNF144A-206ENST00000471060 PLA2G5P39877 138 aa16.98■□□□□ 0.31
RNF144A-206ENST00000471060 KLHDC4Q8TBB5 520 aa16.98■□□□□ 0.31
RNF144A-206ENST00000471060 FAM163AQ96GL9 167 aaPredicted RBP16.98■□□□□ 0.31
RNF144A-206ENST00000471060 APBA2Q99767 749 aa16.98■□□□□ 0.31
RNF144A-206ENST00000471060 TTYH1Q9H313 450 aaPredicted RBP16.98■□□□□ 0.31
RNF144A-206ENST00000471060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
RNF144A-206ENST00000471060 USP17L5A8MUK1 530 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 EYA2O00167 538 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 MSCO60682 206 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 HOXA7P31268 230 aaPredicted RBP16.97■□□□□ 0.31
RNF144A-206ENST00000471060 SHHQ15465 462 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 DDX4Q9NQI0 724 aaKnown RBP16.97■□□□□ 0.31
RNF144A-206ENST00000471060 LTBP2Q14767 1821 aa16.97■□□□□ 0.31
RNF144A-206ENST00000471060 DNM1LO00429 736 aa16.96■□□□□ 0.31
RNF144A-206ENST00000471060 SLURP2P0DP57 97 aa16.96■□□□□ 0.31
RNF144A-206ENST00000471060 CAP2P40123 477 aa16.96■□□□□ 0.31
RNF144A-206ENST00000471060 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
RNF144A-206ENST00000471060 PICALMQ13492 652 aa16.96■□□□□ 0.31
RNF144A-206ENST00000471060 MORN1Q5T089 497 aa16.96■□□□□ 0.31
RNF144A-206ENST00000471060 DZIP1Q86YF9 867 aaKnown RBP16.96■□□□□ 0.31
RNF144A-206ENST00000471060 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
RNF144A-206ENST00000471060 GTF3C2Q8WUA4 911 aaPredicted RBP16.96■□□□□ 0.31
RNF144A-206ENST00000471060 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.3
RNF144A-206ENST00000471060 RTP1P59025 263 aa16.95■□□□□ 0.3
RNF144A-206ENST00000471060 HERVK_113P62684 666 aa16.95■□□□□ 0.3
RNF144A-206ENST00000471060 LPAR1Q92633 364 aa16.95■□□□□ 0.3
RNF144A-206ENST00000471060 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
RNF144A-206ENST00000471060 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
RNF144A-206ENST00000471060 FRMPD3Q5JV73 1810 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
RNF144A-206ENST00000471060 ATN1P54259 1190 aaPredicted RBP16.94■□□□□ 0.3
RNF144A-206ENST00000471060 CCL14Q16627 93 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 MFSD14CQ5VZR4 134 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 P2RX7Q99572 595 aaKnown RBP16.94■□□□□ 0.3
RNF144A-206ENST00000471060 WDR18Q9BV38 432 aa16.94■□□□□ 0.3
RNF144A-206ENST00000471060 DDX20Q9UHI6 824 aaKnown RBP16.94■□□□□ 0.3
RNF144A-206ENST00000471060 BTDP43251 543 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 BACE1P56817 501 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 ERVK-9P63128 1117 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 ERVK-24P63145 666 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 MROH7-TTC4A0A0A0MT08 1334 aa16.93■□□□□ 0.3
RNF144A-206ENST00000471060 PDS5AQ29RF7 1337 aaKnown RBP16.93■□□□□ 0.3
RNF144A-206ENST00000471060 FAM196BA6NMK8 535 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 C19orf81C9J6K1 198 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
RNF144A-206ENST00000471060 RHBDL3P58872 404 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 MAP2K5Q13163 448 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 MTMR2Q13614 643 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
RNF144A-206ENST00000471060 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms