RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
SND1-208ENST00000470463 MMP14P50281 582 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 APLP1P51693 650 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
SND1-208ENST00000470463 GSE1Q14687 1217 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 DIXDC1Q155Q3 683 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 TTC6Q86TZ1 520 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 SH3RF3Q8TEJ3 882 aaPredicted RBP12.83□□□□□ -0.36
SND1-208ENST00000470463 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
SND1-208ENST00000470463 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 DDX49Q9Y6V7 483 aaKnown RBP12.83□□□□□ -0.36
SND1-208ENST00000470463 MYH2Q9UKX2 1941 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 LAMB1P07942 1786 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 STK36Q9NRP7 1315 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
SND1-208ENST00000470463 GOLGA8AA7E2F4 631 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 ECE2O60344 883 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 DDAH1O94760 285 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 KRT85P78386 507 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 PPP4R3BQ5MIZ7 849 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 CATIPQ7Z7H3 387 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 TRIM22Q8IYM9 498 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 ZNF444Q8N0Y2 327 aaPredicted RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 TGFBRAP1Q8WUH2 860 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 SCAND2PQ9GZW5 306 aaPredicted RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 PIM2Q9P1W9 311 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 CFAP45Q9UL16 551 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 TTF2Q9UNY4 1162 aaKnown RBP12.82□□□□□ -0.36
SND1-208ENST00000470463 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 DAGLAQ9Y4D2 1042 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 TNKSO95271 1327 aa12.82□□□□□ -0.36
SND1-208ENST00000470463 SNED1Q8TER0 1413 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
SND1-208ENST00000470463 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 SEC23AQ15436 765 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 DGKHQ86XP1 1220 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 LMBRD1Q9NUN5 540 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
SND1-208ENST00000470463 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
SND1-208ENST00000470463 SERPINA10Q9UK55 444 aa12.81□□□□□ -0.36
SND1-208ENST00000470463 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 C21orf2O43822 256 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 JAK2O60674 1132 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 TOMM70O94826 608 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 IFNAR1P17181 557 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 RHBDL3P58872 404 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 TRIM29Q14134 588 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 RTN1Q16799 776 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 FOXD4L5Q5VV16 416 aaPredicted RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 MICU3Q86XE3 530 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 ZNF654Q8IZM8 581 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 FOXD4L4Q8WXT5 416 aaPredicted RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 DDX11Q96FC9 970 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
SND1-208ENST00000470463 SWAP70Q9UH65 585 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 ELP1O95163 1332 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 FLT1P17948 1338 aa12.8□□□□□ -0.36
SND1-208ENST00000470463 HLA-DOAP06340 250 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 DPEP1P16444 411 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 XBP1P17861 261 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 KIF5BP33176 963 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 UBE2HP62256 183 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 SSRP1Q08945 709 aaKnown RBP12.79□□□□□ -0.36
SND1-208ENST00000470463 GRIK5Q16478 980 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 AOC3Q16853 763 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 DACT2Q5SW24 774 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 C16orf86Q6ZW13 317 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
SND1-208ENST00000470463 FANCBQ8NB91 859 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 DHX36Q9H2U1 1008 aaKnown RBP12.79□□□□□ -0.36
SND1-208ENST00000470463 DBNDD1Q9H9R9 158 aa12.79□□□□□ -0.36
SND1-208ENST00000470463 BAZ2AQ9UIF9 1905 aaKnown RBP12.79□□□□□ -0.36
SND1-208ENST00000470463 NAV1Q8NEY1 1877 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 KIF3CO14782 793 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 DEXIO95424 95 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
SND1-208ENST00000470463 USP17L8P0C7I0 530 aa12.78□□□□□ -0.36
SND1-208ENST00000470463 TSPY3P0CV98 308 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms