RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 CCDC152Q4G0S7 254 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 SYNE3Q6ZMZ3 975 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 TTLL11Q8NHH1 800 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 KCNG4Q8TDN1 519 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 LPIN2Q92539 896 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 C8orf76Q96K31 380 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
SMC4-212ENST00000470240 NACAP1Q9BZK3 213 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 GREM2Q9H772 168 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 CNNM2Q9H8M5 875 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 RIPOR2Q9Y4F9 1068 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 TAF6LQ9Y6J9 622 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMC4-212ENST00000470240 CARMIL3Q8ND23 1372 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 LRP5O75197 1615 aa9.31□□□□□ -0.92
SMC4-212ENST00000470240 KAT6BQ8WYB5 2073 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 GFRA3O60609 400 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 IDH1O75874 414 aaKnown RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 LIG1P18858 919 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 ARID4AP29374 1257 aaPredicted RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 ME1P48163 572 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 TPM4P67936 248 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 SART3Q15020 963 aaKnown RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 STK38Q15208 465 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 PLA2G2CQ5R387 149 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 SLC9C2Q5TAH2 1124 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 RBM43Q6ZSC3 357 aaKnown RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 DRC7Q8IY82 874 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 JMYQ8N9B5 988 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 WASF1Q92558 559 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 SMARCC1Q92922 1105 aaPredicted RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 TMEM87BQ96K49 555 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 UTP14AQ9BVJ6 771 aaKnown RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 CCDC87Q9NVE4 849 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 ORC3Q9UBD5 711 aaPredicted RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 RCOR1Q9UKL0 485 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 ZBTB1Q9Y2K1 713 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 R3HCC1Q9Y3T6 440 aaKnown RBP9.3□□□□□ -0.92
SMC4-212ENST00000470240 ZMYM6O95789 1325 aa9.3□□□□□ -0.92
SMC4-212ENST00000470240 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 BECN2A8MW95 431 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ZBTB24O43167 697 aaPredicted RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 YEATS4O95619 227 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 FGAP02671 866 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ZNF165P49910 485 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 METAP2P50579 478 aaKnown RBP eCLIP9.29□□□□□ -0.92
SMC4-212ENST00000470240 HAND2P61296 217 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 FAM160A1Q05DH4 1040 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 DHX8Q14562 1220 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 HLFQ16534 295 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 CAMK4Q16566 473 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 GLIPR1L2Q4G1C9 344 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ANO6Q4KMQ2 910 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 FAM173BQ6P4H8 233 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 NFXL1Q6ZNB6 911 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 LIAT1Q6ZQX7 453 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 MTERF4Q7Z6M4 381 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 RETREG3Q86VR2 466 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 CCAR1Q8IX12 1150 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 MB21D2Q8IYB1 491 aaPredicted RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 PIBF1Q8WXW3 757 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 MRPS27Q92552 414 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 MAP7D2Q96T17 732 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 CDC5LQ99459 802 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 KRT23Q9C075 422 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 NAPBQ9H115 298 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ANO10Q9NW15 660 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 PCDHGC3Q9UN70 934 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ANGEL1Q9UNK9 670 aaKnown RBP9.29□□□□□ -0.92
SMC4-212ENST00000470240 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 LAMB2P55268 1798 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 ROBO1Q9Y6N7 1651 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 SALL1Q9NSC2 1324 aa9.29□□□□□ -0.92
SMC4-212ENST00000470240 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 ERICH2A1L162 156 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 RRP9O43818 475 aaKnown RBP9.28□□□□□ -0.92
SMC4-212ENST00000470240 NRDCO43847 1150 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 MCAMP43121 646 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 MMP16P51512 607 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 DDB1Q16531 1140 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 ZNF697Q5TEC3 545 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 ZNF598Q86UK7 904 aaKnown RBP9.28□□□□□ -0.92
SMC4-212ENST00000470240 CKAP2LQ8IYA6 745 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 ZNF34Q8IZ26 560 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 CCDC24Q8N4L8 307 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 EMID1Q96A84 441 aaPredicted RBP9.28□□□□□ -0.92
SMC4-212ENST00000470240 PRIMPOLQ96LW4 560 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 TRIM5Q9C035 493 aa9.28□□□□□ -0.92
SMC4-212ENST00000470240 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
SMC4-212ENST00000470240 GNL3LQ9NVN8 582 aaKnown RBP9.28□□□□□ -0.92
SMC4-212ENST00000470240 RTEL1Q9NZ71 1219 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms