RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 DDTLA6NHG4 134 aaPredicted RBP16.31■□□□□ 0.2
LMNA-210ENST00000469565 GSG1L2A8MUP6 293 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
LMNA-210ENST00000469565 TDO2P48775 406 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 TTLL12Q14166 644 aaPredicted RBP16.31■□□□□ 0.2
LMNA-210ENST00000469565 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 PRPF38BQ5VTL8 546 aaKnown RBP16.31■□□□□ 0.2
LMNA-210ENST00000469565 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 CCDC102AQ96A19 550 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 CSRNP1Q96S65 589 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
LMNA-210ENST00000469565 RAD50Q92878 1312 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 HLA-DOAP06340 250 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 MIGA2Q7L4E1 593 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 SH3BP5LQ7L8J4 393 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 NAPBQ9H115 298 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 IL25Q9H293 177 aa16.3■□□□□ 0.2
LMNA-210ENST00000469565 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
LMNA-210ENST00000469565 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
LMNA-210ENST00000469565 MINDY4BA8MYZ0 360 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 FAM155AB1AL88 458 aaPredicted RBP16.29■□□□□ 0.2
LMNA-210ENST00000469565 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 USP17L21D6R901 530 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 SGSM2O43147 1006 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 TRPA1O75762 1119 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
LMNA-210ENST00000469565 KIF23Q02241 960 aaPredicted RBP16.29■□□□□ 0.2
LMNA-210ENST00000469565 TTC6Q86TZ1 520 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
LMNA-210ENST00000469565 TEPSINQ96N21 525 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 TRIM34Q9BYJ4 488 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 GBA2Q9HCG7 927 aaPredicted RBP16.29■□□□□ 0.2
LMNA-210ENST00000469565 RNF186Q9NXI6 227 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
LMNA-210ENST00000469565 RPAP1Q9BWH6 1393 aaPredicted RBP16.28■□□□□ 0.2
LMNA-210ENST00000469565 MYH8P13535 1937 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 CYP2D7A0A087X1C5 515 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 CYP2D6P10635 497 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 ZNF157P51786 506 aaPredicted RBP16.28■□□□□ 0.2
LMNA-210ENST00000469565 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 HOOK2Q96ED9 719 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
LMNA-210ENST00000469565 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 FZD1Q9UP38 647 aa16.28■□□□□ 0.2
LMNA-210ENST00000469565 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.2
LMNA-210ENST00000469565 SLURP2P0DP57 97 aa16.27■□□□□ 0.2
LMNA-210ENST00000469565 PLCD1P51178 756 aa16.27■□□□□ 0.2
LMNA-210ENST00000469565 DCAF15Q66K64 600 aa16.27■□□□□ 0.2
LMNA-210ENST00000469565 GIMAP6Q6P9H5 292 aa16.27■□□□□ 0.2
LMNA-210ENST00000469565 CTR9Q6PD62 1173 aa16.27■□□□□ 0.2
LMNA-210ENST00000469565 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.27■□□□□ 0.2
LMNA-210ENST00000469565 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 FGAP02671 866 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 PTH1RQ03431 593 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
LMNA-210ENST00000469565 DSCC1Q9BVC3 393 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
LMNA-210ENST00000469565 ANGEL1Q9UNK9 670 aaKnown RBP16.26■□□□□ 0.19
LMNA-210ENST00000469565 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
LMNA-210ENST00000469565 SIPA1L1O43166 1804 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 FOXP2O15409 715 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 EVX2Q03828 476 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 MOB2Q70IA6 237 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
LMNA-210ENST00000469565 DYNLL2Q96FJ2 89 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 ZNF341Q9BYN7 854 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 LAMB1P07942 1786 aa16.25■□□□□ 0.19
LMNA-210ENST00000469565 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
LMNA-210ENST00000469565 COL2A1P02458 1487 aaPredicted RBP16.24■□□□□ 0.19
LMNA-210ENST00000469565 UBE2Q2LH0YL09 131 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 SMIM22K7EJ46 135 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 USP2O75604 605 aaPredicted RBP16.24■□□□□ 0.19
LMNA-210ENST00000469565 IREB2P48200 963 aaKnown RBP16.24■□□□□ 0.19
LMNA-210ENST00000469565 HAND2P61296 217 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 ALX1Q15699 326 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 SBK1Q52WX2 424 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
LMNA-210ENST00000469565 SERPINB13Q9UIV8 391 aa16.24■□□□□ 0.19
LMNA-210ENST00000469565 SSC5DA1L4H1 1573 aa16.23■□□□□ 0.19
LMNA-210ENST00000469565 CTDSPL2Q05D32 466 aa16.23■□□□□ 0.19
LMNA-210ENST00000469565 PPARAQ07869 468 aa16.23■□□□□ 0.19
LMNA-210ENST00000469565 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
LMNA-210ENST00000469565 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
LMNA-210ENST00000469565 TBC1D12O60347 775 aa16.22■□□□□ 0.19
LMNA-210ENST00000469565 SLC3A2P08195 630 aaKnown RBP16.22■□□□□ 0.19
LMNA-210ENST00000469565 SLC10A3P09131 477 aa16.22■□□□□ 0.19
LMNA-210ENST00000469565 SLC44A5Q8NCS7 719 aa16.22■□□□□ 0.19
LMNA-210ENST00000469565 WRNIP1Q96S55 665 aa16.22■□□□□ 0.19
LMNA-210ENST00000469565 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
LMNA-210ENST00000469565 RBM8AQ9Y5S9 174 aaKnown RBP16.22■□□□□ 0.19
LMNA-210ENST00000469565 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms