RNA–Protein interactions for RNA: ENST00000468499.5

COPS6-206, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-206ENST00000468499 FBXO3Q9UK99 471 aa22.05■■□□□ 1.12
COPS6-206ENST00000468499 FRMPD3Q5JV73 1810 aa22.05■■□□□ 1.12
COPS6-206ENST00000468499 PFASO15067 1338 aa22.05■■□□□ 1.12
COPS6-206ENST00000468499 PDS5AQ29RF7 1337 aaKnown RBP22.05■■□□□ 1.12
COPS6-206ENST00000468499 DNAH12Q6ZR08 3092 aa22.04■■□□□ 1.12
COPS6-206ENST00000468499 TBC1D12O60347 775 aa22.04■■□□□ 1.12
COPS6-206ENST00000468499 HMGCRP04035 888 aa22.04■■□□□ 1.12
COPS6-206ENST00000468499 CAPN2P17655 700 aa22.04■■□□□ 1.12
COPS6-206ENST00000468499 ANKLE1Q8NAG6 615 aa22.04■■□□□ 1.12
COPS6-206ENST00000468499 PROCA1Q8NCQ7 364 aaPredicted RBP22.04■■□□□ 1.12
COPS6-206ENST00000468499 COL2A1P02458 1487 aaPredicted RBP22.03■■□□□ 1.12
COPS6-206ENST00000468499 GPR75-ASB3A0A0A6YYF3 556 aa22.03■■□□□ 1.12
COPS6-206ENST00000468499 MAGEA10P43363 369 aaPredicted RBP22.03■■□□□ 1.12
COPS6-206ENST00000468499 MECOMQ03112 1051 aa22.03■■□□□ 1.12
COPS6-206ENST00000468499 SPP2Q13103 211 aa22.03■■□□□ 1.12
COPS6-206ENST00000468499 DZIP1Q86YF9 867 aaKnown RBP22.03■■□□□ 1.12
COPS6-206ENST00000468499 FAM9BQ8IZU0 186 aa22.03■■□□□ 1.12
COPS6-206ENST00000468499 ABCF2Q9UG63 623 aa22.03■■□□□ 1.12
COPS6-206ENST00000468499 IL15P40933 162 aaPredicted RBP22.02■■□□□ 1.12
COPS6-206ENST00000468499 HMGCS2P54868 508 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 TIMM10P62072 90 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 JAG1P78504 1218 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 LRIT3Q3SXY7 679 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 MAP3K21Q5TCX8 1036 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 GPR153Q6NV75 609 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 DEFB123Q8N688 67 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 ASCC2Q9H1I8 757 aaPredicted RBP22.02■■□□□ 1.12
COPS6-206ENST00000468499 OGDHLQ9ULD0 1010 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 RPTORQ8N122 1335 aa22.02■■□□□ 1.12
COPS6-206ENST00000468499 PI16Q6UXB8 463 aa22.01■■□□□ 1.11
COPS6-206ENST00000468499 COPRSQ9NQ92 184 aa22.01■■□□□ 1.11
COPS6-206ENST00000468499 NPM3O75607 178 aaKnown RBP22■■□□□ 1.11
COPS6-206ENST00000468499 SHROOM1Q2M3G4 852 aaPredicted RBP22■■□□□ 1.11
COPS6-206ENST00000468499 SH3D19Q5HYK7 790 aa22■■□□□ 1.11
COPS6-206ENST00000468499 POTEEQ6S8J3 1075 aa22■■□□□ 1.11
COPS6-206ENST00000468499 ZGPATQ8N5A5 531 aaKnown RBP22■■□□□ 1.11
COPS6-206ENST00000468499 ZNF280CQ8ND82 737 aa22■■□□□ 1.11
COPS6-206ENST00000468499 NBPF3Q9H094 633 aa22■■□□□ 1.11
COPS6-206ENST00000468499 OSBPL5Q9H0X9 879 aaPredicted RBP22■■□□□ 1.11
COPS6-206ENST00000468499 C11orf49Q9H6J7 331 aa22■■□□□ 1.11
COPS6-206ENST00000468499 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22■■□□□ 1.11
COPS6-206ENST00000468499 TXNRD2Q9NNW7 524 aa22■■□□□ 1.11
COPS6-206ENST00000468499 MTMR10Q9NXD2 777 aa22■■□□□ 1.11
COPS6-206ENST00000468499 MORF4L1Q9UBU8 362 aa22■■□□□ 1.11
COPS6-206ENST00000468499 PNMA3Q9UL41 463 aa22■■□□□ 1.11
COPS6-206ENST00000468499 FOCADQ5VW36 1801 aa22■■□□□ 1.11
COPS6-206ENST00000468499 CDH23Q9H251 3354 aa22■■□□□ 1.11
COPS6-206ENST00000468499 HMX1Q9NP08 348 aaPredicted RBP21.99■■□□□ 1.11
COPS6-206ENST00000468499 MAST2Q6P0Q8 1798 aa21.99■■□□□ 1.11
COPS6-206ENST00000468499 UBTFL1P0CB47 393 aaPredicted RBP21.98■■□□□ 1.11
COPS6-206ENST00000468499 COL6A1P12109 1028 aa21.98■■□□□ 1.11
COPS6-206ENST00000468499 CAP2P40123 477 aa21.98■■□□□ 1.11
COPS6-206ENST00000468499 GCLCP48506 637 aaPredicted RBP21.98■■□□□ 1.11
COPS6-206ENST00000468499 TDHQ8IZJ6 230 aa21.98■■□□□ 1.11
COPS6-206ENST00000468499 NSUN4Q96CB9 384 aaKnown RBP21.98■■□□□ 1.11
COPS6-206ENST00000468499 XAGE2Q96GT9 111 aa21.98■■□□□ 1.11
COPS6-206ENST00000468499 STXBP5LQ9Y2K9 1186 aa21.98■■□□□ 1.11
COPS6-206ENST00000468499 MYO5AQ9Y4I1 1855 aaKnown RBP21.97■■□□□ 1.11
COPS6-206ENST00000468499 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
COPS6-206ENST00000468499 TBC1D9Q6ZT07 1266 aa21.97■■□□□ 1.11
COPS6-206ENST00000468499 DNAJC18Q9H819 358 aa21.97■■□□□ 1.11
COPS6-206ENST00000468499 HMG20BQ9P0W2 317 aa21.97■■□□□ 1.11
COPS6-206ENST00000468499 CYP2B6P20813 491 aa21.96■■□□□ 1.11
COPS6-206ENST00000468499 TFCP2Q12800 502 aa21.96■■□□□ 1.11
COPS6-206ENST00000468499 MEIS3Q99687 375 aa21.96■■□□□ 1.11
COPS6-206ENST00000468499 ANP32CO43423 234 aa21.95■■□□□ 1.1
COPS6-206ENST00000468499 PRKAR2AP13861 404 aaKnown RBP21.95■■□□□ 1.1
COPS6-206ENST00000468499 SLFN5Q08AF3 891 aa21.95■■□□□ 1.1
COPS6-206ENST00000468499 ALDH1L2Q3SY69 923 aa21.95■■□□□ 1.1
COPS6-206ENST00000468499 ERICH6Q7L0X2 663 aa21.95■■□□□ 1.1
COPS6-206ENST00000468499 USP6NLQ92738 828 aa21.95■■□□□ 1.1
COPS6-206ENST00000468499 USP17L5A8MUK1 530 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 MTMR2Q13614 643 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 LHX8Q68G74 356 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 SLF2Q8IX21 1173 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 CDCA7LQ96GN5 454 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 P2RX7Q99572 595 aaKnown RBP21.94■■□□□ 1.1
COPS6-206ENST00000468499 LTBP2Q14767 1821 aa21.94■■□□□ 1.1
COPS6-206ENST00000468499 E9PSI1 815 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 CCND3P30281 292 aaPredicted RBP21.93■■□□□ 1.1
COPS6-206ENST00000468499 CACNB2Q08289 660 aaPredicted RBP21.93■■□□□ 1.1
COPS6-206ENST00000468499 CCL14Q16627 93 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 LRRC26Q2I0M4 334 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 Q3C1V9 767 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 SPTY2D1Q68D10 685 aaPredicted RBP21.93■■□□□ 1.1
COPS6-206ENST00000468499 SMC4Q9NTJ3 1288 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 RBPJLQ9UBG7 517 aa21.93■■□□□ 1.1
COPS6-206ENST00000468499 HOXA7P31268 230 aaPredicted RBP21.92■■□□□ 1.1
COPS6-206ENST00000468499 SH3RF3Q8TEJ3 882 aaPredicted RBP21.92■■□□□ 1.1
COPS6-206ENST00000468499 WDR18Q9BV38 432 aa21.92■■□□□ 1.1
COPS6-206ENST00000468499 COL25A1Q9BXS0 654 aaPredicted RBP21.92■■□□□ 1.1
COPS6-206ENST00000468499 TBC1D2Q9BYX2 928 aa21.92■■□□□ 1.1
COPS6-206ENST00000468499 UBE2OQ9C0C9 1292 aaKnown RBP21.92■■□□□ 1.1
COPS6-206ENST00000468499 PORCNQ9H237 461 aa21.92■■□□□ 1.1
COPS6-206ENST00000468499 PRUNE2Q8WUY3 3088 aa21.91■■□□□ 1.1
COPS6-206ENST00000468499 BACE1P56817 501 aa21.91■■□□□ 1.1
COPS6-206ENST00000468499 HERVK_113P62684 666 aa21.91■■□□□ 1.1
COPS6-206ENST00000468499 PABPC4Q13310 644 aaKnown RBP eCLIP21.91■■□□□ 1.11e-6■□□□□ 10.4
COPS6-206ENST00000468499 SPATA5Q8NB90 893 aa21.91■■□□□ 1.1
COPS6-206ENST00000468499 GUCD1Q96NT3 240 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms