RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 MAP2K1Q02750 393 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 NOL9Q5SY16 702 aaKnown RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 ERO1BQ86YB8 467 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
SSBP1-206ENST00000467681 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 WBP1LQ9NX94 342 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 PPP4R2Q9NY27 417 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
SSBP1-206ENST00000467681 GSG1L2A8MUP6 293 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 ZBTB48P10074 688 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-206ENST00000467681 GNAT2P19087 354 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 SDSP20132 328 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 GJA5P36382 358 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 PLCD1P51178 756 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 EHD4Q9H223 541 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 MAST2Q6P0Q8 1798 aa16.35■□□□□ 0.21
SSBP1-206ENST00000467681 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
SSBP1-206ENST00000467681 TM4SF4P48230 202 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 MKRN3Q13064 507 aaKnown RBP16.34■□□□□ 0.21
SSBP1-206ENST00000467681 RRP1BQ14684 758 aaKnown RBP16.34■□□□□ 0.21
SSBP1-206ENST00000467681 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 OPTNQ96CV9 577 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 DDRGK1Q96HY6 314 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 SERPINB13Q9UIV8 391 aa16.34■□□□□ 0.21
SSBP1-206ENST00000467681 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 USP17L21D6R901 530 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 CAP2P40123 477 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 INHBEP58166 350 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 PPATQ06203 517 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 SLC4A8Q2Y0W8 1093 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 MCMDC2Q4G0Z9 681 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 C12orf60Q5U649 245 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 SCYL3Q8IZE3 742 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
SSBP1-206ENST00000467681 FAM227BQ96M60 508 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 TRIM34Q9BYJ4 488 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 DNAJC18Q9H819 358 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 PICK1Q9NRD5 415 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
SSBP1-206ENST00000467681 MANSC4A6NHS7 340 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-206ENST00000467681 CYP2D6P10635 497 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 GSPT1P15170 499 aaKnown RBP16.32■□□□□ 0.2
SSBP1-206ENST00000467681 GABPAQ06546 454 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 NMIQ13287 307 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-206ENST00000467681 SBK1Q52WX2 424 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 TATDN1Q6P1N9 297 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 CTR9Q6PD62 1173 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 OTUD5Q96G74 571 aa16.32■□□□□ 0.2
SSBP1-206ENST00000467681 HIP1O00291 1037 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 APPP05067 770 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 PTPRAP18433 802 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 PPIL2Q13356 520 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 MS4A4AQ96JQ5 239 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 ZHX2Q9Y6X8 837 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 MYH7P12883 1935 aa16.31■□□□□ 0.2
SSBP1-206ENST00000467681 CYP2D7A0A087X1C5 515 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 A0A0D9SFI3 127 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SSBP1-206ENST00000467681 CXCL11O14625 94 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 IRF6O14896 467 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 GTF2A2P52657 109 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 EVX2Q03828 476 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 AMOTL1Q8IY63 956 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 DIAPH3Q9NSV4 1193 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
SSBP1-206ENST00000467681 HSPA1AP0DMV8 641 aaKnown RBP16.29■□□□□ 0.2
SSBP1-206ENST00000467681 HSPA1BP0DMV9 641 aaKnown RBP16.29■□□□□ 0.2
SSBP1-206ENST00000467681 SHMT1P34896 483 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 JAG1P78504 1218 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 SREBF2Q12772 1141 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 SNAPC2Q13487 334 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 ALX1Q15699 326 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 DYNLL2Q96FJ2 89 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
SSBP1-206ENST00000467681 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 KCNH4Q9UQ05 1017 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 AFG3L2Q9Y4W6 797 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 CDK5RAP2Q96SN8 1893 aa16.29■□□□□ 0.2
SSBP1-206ENST00000467681 MYH1P12882 1939 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 SMIM22K7EJ46 135 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 FOXP2O15409 715 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 CA12O43570 354 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 ASNSP08243 561 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 CETPP11597 493 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 CERKLQ49MI3 558 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-206ENST00000467681 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
SSBP1-206ENST00000467681 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
SSBP1-206ENST00000467681 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-206ENST00000467681 USP17L5A8MUK1 530 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms