RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 RAI14Q9P0K7 980 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 SNX14Q9Y5W7 946 aa17.89■□□□□ 0.45
SNED1-208ENST00000466618 PSME4Q14997 1843 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 DOCK2Q92608 1830 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
SNED1-208ENST00000466618 RNF113AO15541 343 aaKnown RBP17.88■□□□□ 0.45
SNED1-208ENST00000466618 UBE3CQ15386 1083 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 CREBRFQ8IUR6 639 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 ZNF592Q92610 1267 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 ZNF446Q9NWS9 450 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 LIMCH1Q9UPQ0 1083 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
SNED1-208ENST00000466618 MYH13Q9UKX3 1938 aa17.88■□□□□ 0.45
SNED1-208ENST00000466618 USP27XA6NNY8 438 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 LIG1P18858 919 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
SNED1-208ENST00000466618 ELF2Q15723 593 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 ANO6Q4KMQ2 910 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 MAGEB6Q8N7X4 407 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 CAMK4Q16566 473 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 LRRFIP1Q32MZ4 808 aaKnown RBP17.87■□□□□ 0.45
SNED1-208ENST00000466618 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 GPC2Q8N158 579 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 MRIQ9BWK5 157 aa17.87■□□□□ 0.45
SNED1-208ENST00000466618 ZNF532Q9HCE3 1301 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 HIP1O00291 1037 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 RPS12P25398 132 aaKnown RBP17.86■□□□□ 0.45
SNED1-208ENST00000466618 GJB2P29033 226 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 CYP2C19P33261 490 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 ZMYM1Q5SVZ6 1142 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 ADGRA1Q86SQ6 560 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 TTC6Q86TZ1 520 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
SNED1-208ENST00000466618 ERO1AQ96HE7 468 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 TTF2Q9UNY4 1162 aaKnown RBP17.86■□□□□ 0.45
SNED1-208ENST00000466618 CCDC88AQ3V6T2 1871 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 DTNBO60941 627 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 NAA16Q6N069 864 aaPredicted RBP17.86■□□□□ 0.45
SNED1-208ENST00000466618 DZIP1Q86YF9 867 aaKnown RBP17.86■□□□□ 0.45
SNED1-208ENST00000466618 RASEFQ8IZ41 740 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 DPF2Q92785 391 aa17.86■□□□□ 0.45
SNED1-208ENST00000466618 HDLBPQ00341 1268 aaKnown RBP17.85■□□□□ 0.45
SNED1-208ENST00000466618 DIXDC1Q155Q3 683 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 OSBP2Q969R2 916 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 FAM227BQ96M60 508 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 CLIP2Q9UDT6 1046 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 TIAM2Q8IVF5 1701 aa17.85■□□□□ 0.45
SNED1-208ENST00000466618 F8W031 263 aaPredicted RBP17.84■□□□□ 0.45
SNED1-208ENST00000466618 NMIQ13287 307 aaPredicted RBP17.84■□□□□ 0.45
SNED1-208ENST00000466618 CKAP2LQ8IYA6 745 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 APPBP2Q92624 585 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 GAKO14976 1311 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 MAST3O60307 1309 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 A0A0D9SFI3 127 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 CYP7A1P22680 504 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 GMPSP49915 693 aaPredicted RBP17.84■□□□□ 0.45
SNED1-208ENST00000466618 GSTO1P78417 241 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 RBM43Q6ZSC3 357 aaKnown RBP17.84■□□□□ 0.45
SNED1-208ENST00000466618 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
SNED1-208ENST00000466618 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
SNED1-208ENST00000466618 CDC25BP30305 580 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 MMP14P50281 582 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 ST3GAL1Q11201 340 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 CCDC83Q8IWF9 413 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.45
SNED1-208ENST00000466618 HELLSQ9NRZ9 838 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 SERPINA10Q9UK55 444 aa17.83■□□□□ 0.45
SNED1-208ENST00000466618 DDNO94850 711 aaPredicted RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 USP17L8P0C7I0 530 aa17.83■□□□□ 0.44
SNED1-208ENST00000466618 SCNN1DP51172 638 aa17.83■□□□□ 0.44
SNED1-208ENST00000466618 HNRNPH2P55795 449 aaKnown RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 ZNF280AP59817 542 aaPredicted RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 CWC27Q6UX04 472 aaKnown RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 LRRC8AQ8IWT6 810 aa17.83■□□□□ 0.44
SNED1-208ENST00000466618 LSG1Q9H089 658 aaKnown RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 MYO5AQ9Y4I1 1855 aaKnown RBP17.83■□□□□ 0.44
SNED1-208ENST00000466618 MROH7-TTC4A0A0A0MT08 1334 aa17.83■□□□□ 0.44
SNED1-208ENST00000466618 CPA1P15085 419 aa17.82■□□□□ 0.44
SNED1-208ENST00000466618 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
SNED1-208ENST00000466618 SLF2Q8IX21 1173 aa17.82■□□□□ 0.44
SNED1-208ENST00000466618 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
SNED1-208ENST00000466618 ELP1O95163 1332 aa17.82■□□□□ 0.44
SNED1-208ENST00000466618 MAST2Q6P0Q8 1798 aa17.82■□□□□ 0.44
SNED1-208ENST00000466618 GPR75-ASB3A0A0A6YYF3 556 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 SGSM2O43147 1006 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 LDHCP07864 332 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 CRKP46108 304 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 PTPN14Q15678 1187 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 ZDHHC15Q96MV8 337 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 RIOK1Q9BRS2 568 aaKnown RBP17.81■□□□□ 0.44
SNED1-208ENST00000466618 TRIM34Q9BYJ4 488 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 TNMDQ9H2S6 317 aa17.81■□□□□ 0.44
SNED1-208ENST00000466618 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
SNED1-208ENST00000466618 DAGLAQ9Y4D2 1042 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms