RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 APPBP2Q92624 585 aa14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 DHX36Q9H2U1 1008 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 MCM9Q9NXL9 1143 aa14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 SNCAIPQ9Y6H5 919 aa14.48□□□□□ -0.09
SHROOM3-202ENST00000466541 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 PHF20L1A8MW92 1017 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 APPP05067 770 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 CYP2D6P10635 497 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 GJA5P36382 358 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 DDRGK1Q96HY6 314 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 PICK1Q9NRD5 415 aa14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-202ENST00000466541 SIPA1L1O43166 1804 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 PLCD1P51178 756 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 EVX2Q03828 476 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 CCDC129Q6ZRS4 1044 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 CENPQQ7L2Z9 268 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 STK11IPQ8N1F8 1099 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 STRBPQ96SI9 672 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 DCP1AQ9NPI6 582 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 WBP1LQ9NX94 342 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
SHROOM3-202ENST00000466541 CYP2D7A0A087X1C5 515 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 UNCXA6NJT0 531 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 GPAA1O43292 621 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 TRPA1O75762 1119 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 TTC6Q86TZ1 520 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 CCDC84Q86UT8 332 aaPredicted RBP14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 OSBPL3Q9H4L5 887 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 ATP8A2Q9NTI2 1148 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 ATAD5Q96QE3 1844 aa14.45□□□□□ -0.1
SHROOM3-202ENST00000466541 THSD7BQ9C0I4 1608 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 COL2A1P02458 1487 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 DOCK1Q14185 1865 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 FOXN1O15353 648 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 TBC1D12O60347 775 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 CTNND1O60716 968 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 GDF11O95390 407 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 ZBTB48P10074 688 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 MAP3K10Q02779 954 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 RRP1BQ14684 758 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 ERO1BQ86YB8 467 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 FOXP4Q8IVH2 680 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 AMOTL1Q8IY63 956 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 FAM227BQ96M60 508 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 HERC5Q9UII4 1024 aaKnown RBP14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 ZHX2Q9Y6X8 837 aa14.44□□□□□ -0.1
SHROOM3-202ENST00000466541 MANSC4A6NHS7 340 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 SPDYE5A6NIY4 337 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 MINDY4BA8MYZ0 360 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 USP17L12C9JPN9 530 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 USP17L21D6R901 530 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 IRF6O14896 467 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 TDO2P48775 406 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 SREBF2Q12772 1141 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 NMIQ13287 307 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 SHROOM1Q2M3G4 852 aaPredicted RBP14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 DYNLL2Q96FJ2 89 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 DNAJC18Q9H819 358 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 MYH8P13535 1937 aa14.43□□□□□ -0.1
SHROOM3-202ENST00000466541 A0A0D9SFI3 127 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 TRIM75PA6NK02 468 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 GSG1L2A8MUP6 293 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 SMIM22K7EJ46 135 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 PTPRAP18433 802 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 CAP2P40123 477 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 GTF2A2P52657 109 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 PPATQ06203 517 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 PPIL2Q13356 520 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 NOL9Q5SY16 702 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 CWC27Q6UX04 472 aaKnown RBP14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 SLC44A5Q8NCS7 719 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 DIAPH3Q9NSV4 1193 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 RNF186Q9NXI6 227 aa14.42□□□□□ -0.1
SHROOM3-202ENST00000466541 DDX60LQ5H9U9 1706 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 PATL2C9JE40 543 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 MPHOSPH10O00566 681 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 GNAT2P19087 354 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 SDSP20132 328 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 TM4SF4P48230 202 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 LBX1P52954 281 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 SNAPC2Q13487 334 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 CCL15Q16663 113 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 CERKLQ49MI3 558 aaPredicted RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 MCMDC2Q4G0Z9 681 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 CTR9Q6PD62 1173 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 NACAP1Q9BZK3 213 aa14.41□□□□□ -0.1
SHROOM3-202ENST00000466541 TBC1D8O95759 1140 aa14.4□□□□□ -0.1
SHROOM3-202ENST00000466541 GH2P01242 217 aa14.4□□□□□ -0.1
SHROOM3-202ENST00000466541 CTCFP49711 727 aaPredicted RBP14.4□□□□□ -0.1
SHROOM3-202ENST00000466541 JAG1P78504 1218 aa14.4□□□□□ -0.1
SHROOM3-202ENST00000466541 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
SHROOM3-202ENST00000466541 C12orf60Q5U649 245 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms