RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
CLDN4-204ENST00000466411 MINPP1Q9UNW1 487 aa8.53□□□□□ -1.04
CLDN4-204ENST00000466411 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
CLDN4-204ENST00000466411 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.04
CLDN4-204ENST00000466411 SPDYE16A6NNV3 312 aaPredicted RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 BTBD19C9JJ37 291 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 EYA2O00167 538 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 PLIN1O60240 522 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 UFL1O94874 794 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 GTF2A2P52657 109 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 G3BP1Q13283 466 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 PUM3Q15397 648 aaKnown RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 C15orf52Q6ZUT6 534 aaKnown RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 ZNF804AQ7Z570 1209 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 OXER1Q8TDS5 423 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 JARID2Q92833 1246 aaPredicted RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
CLDN4-204ENST00000466411 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 CEP126Q9P2H0 1117 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 GABRQQ9UN88 632 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 ZNF804BA4D1E1 1349 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 MYPNQ86TC9 1320 aa8.52□□□□□ -1.05
CLDN4-204ENST00000466411 MYO9BQ13459 2157 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 IGSF3O75054 1194 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 PDE8BO95263 885 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 IFIT1P09914 478 aaKnown RBP8.51□□□□□ -1.05
CLDN4-204ENST00000466411 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
CLDN4-204ENST00000466411 PRKCZQ05513 592 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 CHRNDQ07001 517 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 OS9Q13438 667 aaPredicted RBP8.51□□□□□ -1.05
CLDN4-204ENST00000466411 CAVIN4Q5BKX8 364 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 METTL24Q5JXM2 366 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 EPHA10Q5JZY3 1008 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 SMYD5Q6GMV2 418 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 CEP85Q6P2H3 762 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 SLAIN1Q8ND83 568 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 LRFN3Q9BTN0 628 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 GPR108Q9NPR9 543 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 GNL3LQ9NVN8 582 aaKnown RBP8.51□□□□□ -1.05
CLDN4-204ENST00000466411 SUPT16HQ9Y5B9 1047 aaKnown RBP8.51□□□□□ -1.05
CLDN4-204ENST00000466411 AOX1Q06278 1338 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
CLDN4-204ENST00000466411 SLC5A1P13866 664 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 HOXD10P28358 340 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 RFX5P48382 616 aaPredicted RBP8.5□□□□□ -1.05
CLDN4-204ENST00000466411 SUPT20HL1Q3ZLR7 823 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 STRIP1Q5VSL9 837 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 LPIN2Q92539 896 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 C1QTNF1Q9BXJ1 281 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 COA1Q9GZY4 146 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
CLDN4-204ENST00000466411 CPA4Q9UI42 421 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 TNNQ9UQP3 1299 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
CLDN4-204ENST00000466411 PCDHAC2Q9Y5I4 1007 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 PFASO15067 1338 aa8.5□□□□□ -1.05
CLDN4-204ENST00000466411 TCF20Q9UGU0 1960 aaKnown RBP8.5□□□□□ -1.05
CLDN4-204ENST00000466411 DDX60LQ5H9U9 1706 aaKnown RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 INHAP05111 366 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 FOSL2P15408 326 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 ELNP15502 786 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 C20orf194Q5TEA3 1177 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 TMED8Q6PL24 325 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 ADAMTS19Q8TE59 1207 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 PXYLP1Q8TE99 480 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 KIF1BPQ96EK5 621 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 ASB2Q96Q27 587 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 NBPF3Q9H094 633 aa8.49□□□□□ -1.05
CLDN4-204ENST00000466411 RWDD1Q9H446 243 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
CLDN4-204ENST00000466411 ADCY3O60266 1144 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 SURF6O75683 361 aaKnown RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 FMNL1O95466 1100 aaPredicted RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 VGLL4Q14135 290 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 ZGPATQ8N5A5 531 aaKnown RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 VGLL2Q8N8G2 317 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 GPATCH3Q96I76 525 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 SIL1Q9H173 461 aa8.48□□□□□ -1.05
CLDN4-204ENST00000466411 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
CLDN4-204ENST00000466411 PNMA6EA0A0J9YXQ4 647 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 BCRP11274 1271 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 CETPP11597 493 aa8.47□□□□□ -1.05
CLDN4-204ENST00000466411 COL6A1P12109 1028 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms