RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
VPS52-214ENST00000463486 TESPA1A2RU30 521 aaPredicted RBP21.34■■□□□ 1.01
VPS52-214ENST00000463486 ZFYP08048 801 aaPredicted RBP21.34■■□□□ 1.01
VPS52-214ENST00000463486 USP5P45974 858 aa21.34■■□□□ 1.01
VPS52-214ENST00000463486 EVX2Q03828 476 aa21.34■■□□□ 1.01
VPS52-214ENST00000463486 ERO1BQ86YB8 467 aa21.34■■□□□ 1.01
VPS52-214ENST00000463486 FOXP4Q8IVH2 680 aaPredicted RBP21.34■■□□□ 1.01
VPS52-214ENST00000463486 APPBP2Q92624 585 aa21.34■■□□□ 1.01
VPS52-214ENST00000463486 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.34■■□□□ 1.01
VPS52-214ENST00000463486 HERC5Q9UII4 1024 aaKnown RBP21.34■■□□□ 1.01
VPS52-214ENST00000463486 CTNND1O60716 968 aaKnown RBP21.33■■□□□ 1.01
VPS52-214ENST00000463486 PLCD1P51178 756 aa21.33■■□□□ 1.01
VPS52-214ENST00000463486 JAG1P78504 1218 aa21.33■■□□□ 1.01
VPS52-214ENST00000463486 EVI5LQ96CN4 794 aa21.33■■□□□ 1.01
VPS52-214ENST00000463486 RNF186Q9NXI6 227 aa21.33■■□□□ 1.01
VPS52-214ENST00000463486 MYH1P12882 1939 aa21.32■■□□□ 1
VPS52-214ENST00000463486 M0R2C6 588 aa21.32■■□□□ 1
VPS52-214ENST00000463486 IRF6O14896 467 aa21.32■■□□□ 1
VPS52-214ENST00000463486 PPATQ06203 517 aa21.32■■□□□ 1
VPS52-214ENST00000463486 ZMYM1Q5SVZ6 1142 aa21.32■■□□□ 1
VPS52-214ENST00000463486 SCYL3Q8IZE3 742 aa21.32■■□□□ 1
VPS52-214ENST00000463486 OTUD5Q96G74 571 aa21.32■■□□□ 1
VPS52-214ENST00000463486 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
VPS52-214ENST00000463486 PTPN18Q99952 460 aa21.32■■□□□ 1
VPS52-214ENST00000463486 FSD1Q9BTV5 496 aa21.32■■□□□ 1
VPS52-214ENST00000463486 EHD4Q9H223 541 aa21.32■■□□□ 1
VPS52-214ENST00000463486 MANSC4A6NHS7 340 aaPredicted RBP21.31■■□□□ 1
VPS52-214ENST00000463486 HSPA8P11142 646 aaKnown RBP21.31■■□□□ 1
VPS52-214ENST00000463486 INHBEP58166 350 aa21.31■■□□□ 1
VPS52-214ENST00000463486 PPIL2Q13356 520 aa21.31■■□□□ 1
VPS52-214ENST00000463486 SLC4A8Q2Y0W8 1093 aa21.31■■□□□ 1
VPS52-214ENST00000463486 AIDAQ96BJ3 306 aa21.31■■□□□ 1
VPS52-214ENST00000463486 SMIM22K7EJ46 135 aa21.3■■□□□ 1
VPS52-214ENST00000463486 IGF2BP3O00425 579 aaKnown RBP eCLIP21.3■■□□□ 1
VPS52-214ENST00000463486 PTPRAP18433 802 aa21.3■■□□□ 1
VPS52-214ENST00000463486 GABPAQ06546 454 aa21.3■■□□□ 1
VPS52-214ENST00000463486 TICAM2Q86XR7 235 aa21.3■■□□□ 1
VPS52-214ENST00000463486 BRI3BPQ8WY22 251 aa21.3■■□□□ 1
VPS52-214ENST00000463486 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
VPS52-214ENST00000463486 SAGE1Q9NXZ1 904 aa21.3■■□□□ 1
VPS52-214ENST00000463486 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.3■■□□□ 1
VPS52-214ENST00000463486 KCNH4Q9UQ05 1017 aa21.3■■□□□ 1
VPS52-214ENST00000463486 GSG1L2A8MUP6 293 aa21.29■■□□□ 1
VPS52-214ENST00000463486 CA12O43570 354 aa21.29■■□□□ 1
VPS52-214ENST00000463486 CYP2D6P10635 497 aa21.29■■□□□ 1
VPS52-214ENST00000463486 CAP2P40123 477 aa21.29■■□□□ 1
VPS52-214ENST00000463486 CTCFP49711 727 aaPredicted RBP21.29■■□□□ 1
VPS52-214ENST00000463486 SREBF2Q12772 1141 aa21.29■■□□□ 1
VPS52-214ENST00000463486 MOGSQ13724 837 aa21.29■■□□□ 1
VPS52-214ENST00000463486 SHROOM1Q2M3G4 852 aaPredicted RBP21.29■■□□□ 1
VPS52-214ENST00000463486 TATDN1Q6P1N9 297 aa21.29■■□□□ 1
VPS52-214ENST00000463486 TTC6Q86TZ1 520 aa21.29■■□□□ 1
VPS52-214ENST00000463486 MCM9Q9NXL9 1143 aa21.29■■□□□ 1
VPS52-214ENST00000463486 TSKSQ9UJT2 592 aa21.29■■□□□ 1
VPS52-214ENST00000463486 SLC4A4Q9Y6R1 1079 aa21.29■■□□□ 1
VPS52-214ENST00000463486 GPAA1O43292 621 aa21.28■■□□□ 1
VPS52-214ENST00000463486 TRPA1O75762 1119 aa21.28■■□□□ 1
VPS52-214ENST00000463486 HLA-DOAP06340 250 aa21.28■■□□□ 1
VPS52-214ENST00000463486 LRRFIP1Q32MZ4 808 aaKnown RBP21.28■■□□□ 1
VPS52-214ENST00000463486 IFNL1Q8IU54 200 aa21.28■■□□□ 1
VPS52-214ENST00000463486 BEGAINQ9BUH8 593 aa21.28■■□□□ 1
VPS52-214ENST00000463486 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
VPS52-214ENST00000463486 AFG3L2Q9Y4W6 797 aa21.28■■□□□ 1
VPS52-214ENST00000463486 NAV1Q8NEY1 1877 aa21.28■■□□□ 1
VPS52-214ENST00000463486 FOXP2O15409 715 aa21.27■■□□□ 1
VPS52-214ENST00000463486 SHMT1P34896 483 aa21.27■■□□□ 1
VPS52-214ENST00000463486 GTF2A2P52657 109 aa21.27■■□□□ 1
VPS52-214ENST00000463486 LBX1P52954 281 aa21.27■■□□□ 1
VPS52-214ENST00000463486 CCDC84Q86UT8 332 aaPredicted RBP21.27■■□□□ 1
VPS52-214ENST00000463486 CFHR5Q9BXR6 569 aa21.27■■□□□ 1
VPS52-214ENST00000463486 R3HDMLQ9H3Y0 253 aa21.27■■□□□ 1
VPS52-214ENST00000463486 EPB41L4AQ9HCS5 686 aaPredicted RBP21.27■■□□□ 1
VPS52-214ENST00000463486 ZHX2Q9Y6X8 837 aa21.27■■□□□ 1
VPS52-214ENST00000463486 PHIPQ8WWQ0 1821 aa21.27■□□□□ 0.99
VPS52-214ENST00000463486 DOCK1Q14185 1865 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 CYP2D7A0A087X1C5 515 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 USP17L12C9JPN9 530 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 USP17L21D6R901 530 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 GSPT1P15170 499 aaKnown RBP21.26■□□□□ 0.99
VPS52-214ENST00000463486 C12orf60Q5U649 245 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 CTR9Q6PD62 1173 aa21.26■□□□□ 0.99
VPS52-214ENST00000463486 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
VPS52-214ENST00000463486 CCL15-CCL14A0A0B4J2E2 113 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 CXCL11O14625 94 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
VPS52-214ENST00000463486 SNAPC2Q13487 334 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 CCL15Q16663 113 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 GIMAP6Q6P9H5 292 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 CRACR2BQ8N4Y2 399 aaPredicted RBP21.25■□□□□ 0.99
VPS52-214ENST00000463486 FAM227BQ96M60 508 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 PICK1Q9NRD5 415 aa21.25■□□□□ 0.99
VPS52-214ENST00000463486 TRIM6-TRIM34B2RNG4 842 aa21.24■□□□□ 0.99
VPS52-214ENST00000463486 CENPQQ7L2Z9 268 aaPredicted RBP21.24■□□□□ 0.99
VPS52-214ENST00000463486 PRDM10Q9NQV6 1147 aa21.24■□□□□ 0.99
VPS52-214ENST00000463486 A0A0D9SFI3 127 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 PATL2C9JE40 543 aaKnown RBP21.23■□□□□ 0.99
VPS52-214ENST00000463486 GDF11O95390 407 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
VPS52-214ENST00000463486 CETPP11597 493 aa21.23■□□□□ 0.99
VPS52-214ENST00000463486 GNAT2P19087 354 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms