RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 WNT10AQ9GZT5 417 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 AP4E1Q9UPM8 1137 aa8.28□□□□□ -1.08
CCDC50-203ENST00000460064 WIPF1O43516 503 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 DRD2P14416 443 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 RING1Q06587 406 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 RAB33AQ14088 237 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 RUFY4Q6ZNE9 571 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 NOP9Q86U38 636 aaKnown RBP8.27□□□□□ -1.09
CCDC50-203ENST00000460064 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
CCDC50-203ENST00000460064 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 CRIM1Q9NZV1 1036 aa8.27□□□□□ -1.09
CCDC50-203ENST00000460064 FANCGO15287 622 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 SOX4Q06945 474 aaPredicted RBP8.26□□□□□ -1.09
CCDC50-203ENST00000460064 SHISA2Q6UWI4 295 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 DYMQ7RTS9 669 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
CCDC50-203ENST00000460064 AGGF1Q8N302 714 aaeCLIP8.26□□□□□ -1.09
CCDC50-203ENST00000460064 ZSCAN1Q8NBB4 408 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 SUGCTQ9HAC7 445 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 DISC1Q9NRI5 854 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 ACTR10Q9NZ32 417 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 SIRPGQ9P1W8 387 aa8.26□□□□□ -1.09
CCDC50-203ENST00000460064 SLC22A31A6NKX4 558 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 SMARCA5O60264 1052 aaPredicted RBP8.25□□□□□ -1.09
CCDC50-203ENST00000460064 BMS1Q14692 1282 aaKnown RBP8.25□□□□□ -1.09
CCDC50-203ENST00000460064 TMEM201Q5SNT2 666 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ZBTB37Q5TC79 503 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 FDX2Q6P4F2 183 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 CDC37L1Q7L3B6 337 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 TMEM130Q8N3G9 435 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 RNF214Q8ND24 703 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ZNF507Q8TCN5 953 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 TMEM40Q8WWA1 233 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ATXN3LQ9H3M9 355 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 PIF1Q9H611 641 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ST7Q9NRC1 585 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 GMIPQ9P107 970 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 KLHL3Q9UH77 587 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ADAM30Q9UKF2 790 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 ADAMTS8Q9UP79 889 aa8.25□□□□□ -1.09
CCDC50-203ENST00000460064 K7ELQ4 463 aaPredicted RBP8.24□□□□□ -1.09
CCDC50-203ENST00000460064 RNGTTO60942 597 aaKnown RBP8.24□□□□□ -1.09
CCDC50-203ENST00000460064 ALX3O95076 343 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 ADH5P11766 374 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 TTLL4Q14679 1199 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 ATG4CQ96DT6 458 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 TM9SF2Q99805 663 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 TNKS2Q9H2K2 1166 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 USP21Q9UK80 565 aa8.24□□□□□ -1.09
CCDC50-203ENST00000460064 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
CCDC50-203ENST00000460064 CHURC1-FNTBB4DL54 471 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 F8W735 103 aaPredicted RBP8.23□□□□□ -1.09
CCDC50-203ENST00000460064 HCLS1P14317 486 aaPredicted RBP8.23□□□□□ -1.09
CCDC50-203ENST00000460064 ASPAP45381 313 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 CASP7P55210 303 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 SERINC3Q13530 473 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
CCDC50-203ENST00000460064 MRFAP1L1Q96HT8 127 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 PIDD1Q9HB75 910 aa8.23□□□□□ -1.09
CCDC50-203ENST00000460064 SSU72Q9NP77 194 aaKnown RBP8.23□□□□□ -1.09
CCDC50-203ENST00000460064 CCDC85CA6NKD9 419 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 UPK3BL1B0FP48 263 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 UPK3BL2E5RIL1 263 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 SART1O43290 800 aaKnown RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 DNAJA2O60884 412 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 SPATA31C1P0DKV0 1188 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 FXNQ16595 210 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 ARSHQ5FYA8 562 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 LARP1BQ659C4 914 aaKnown RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 ANKRD34AQ69YU3 496 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 NLRC3Q7RTR2 1065 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 TTC6Q86TZ1 520 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 HID1Q8IV36 788 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 MCATQ8IVS2 390 aaKnown RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 FAM13CQ8NE31 585 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 MKL1Q969V6 931 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 LENG1Q96BZ8 264 aaPredicted RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 SRPK1Q96SB4 655 aaKnown RBP8.22□□□□□ -1.09
CCDC50-203ENST00000460064 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 TJP2Q9UDY2 1190 aa8.22□□□□□ -1.09
CCDC50-203ENST00000460064 A0A1W2PQH9 124 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 TIAF1O95411 115 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 NME1P15531 152 aaKnown RBP8.21□□□□□ -1.1
CCDC50-203ENST00000460064 CDCP2Q5VXM1 449 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 INTS3Q68E01 1043 aaKnown RBP8.21□□□□□ -1.1
CCDC50-203ENST00000460064 SLC6A19Q695T7 634 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 CELF2-AS1Q8N7Q2 184 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 KCT2Q8NC54 265 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 SCARF2Q96GP6 870 aaPredicted RBP8.21□□□□□ -1.1
CCDC50-203ENST00000460064 TMEM87BQ96K49 555 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 CNNM2Q9H8M5 875 aa8.21□□□□□ -1.1
CCDC50-203ENST00000460064 TLDC2A0PJX2 215 aa8.2□□□□□ -1.1
CCDC50-203ENST00000460064 C9orf172C9J069 976 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms