RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 WDHD1O75717 1129 aaPredicted RBP28.67■■■□□ 2.18
U2AF1-204ENST00000459639 BRD1O95696 1058 aa28.67■■■□□ 2.18
U2AF1-204ENST00000459639 SAP30BPQ9UHR5 308 aaKnown RBP28.67■■■□□ 2.18
U2AF1-204ENST00000459639 RANBP6O60518 1105 aaKnown RBP28.67■■■□□ 2.18
U2AF1-204ENST00000459639 RAD17O75943 681 aa28.67■■■□□ 2.18
U2AF1-204ENST00000459639 TMTC2Q8N394 836 aa28.67■■■□□ 2.18
U2AF1-204ENST00000459639 ZDHHC9Q9Y397 364 aa28.67■■■□□ 2.18
U2AF1-204ENST00000459639 PRDM1O75626 825 aa28.66■■■□□ 2.18
U2AF1-204ENST00000459639 PDIA4P13667 645 aaKnown RBP28.66■■■□□ 2.18
U2AF1-204ENST00000459639 WTAPQ15007 396 aa28.66■■■□□ 2.18
U2AF1-204ENST00000459639 HPS5Q9UPZ3 1129 aa28.66■■■□□ 2.18
U2AF1-204ENST00000459639 CCT2P78371 535 aaKnown RBP28.65■■■□□ 2.18
U2AF1-204ENST00000459639 APOA5Q6Q788 366 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 NFXL1Q6ZNB6 911 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 IQCA1Q86XH1 822 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 SMARCC2Q8TAQ2 1214 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 JDP2Q8WYK2 163 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 GMLQ99445 158 aa28.65■■■□□ 2.18
U2AF1-204ENST00000459639 WDR33Q9C0J8 1336 aaKnown RBP28.65■■■□□ 2.18
U2AF1-204ENST00000459639 DHX16O60231 1041 aaKnown RBP28.64■■■□□ 2.18
U2AF1-204ENST00000459639 PLCD1P51178 756 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 RBM5P52756 815 aaKnown RBP eCLIP28.64■■■□□ 2.18
U2AF1-204ENST00000459639 SLC4A8Q2Y0W8 1093 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 CLEC17AQ6ZS10 378 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 ZKSCAN3Q9BRR0 538 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 ZNF287Q9HBT7 754 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 TNKSO95271 1327 aa28.64■■■□□ 2.18
U2AF1-204ENST00000459639 MYH8P13535 1937 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 CCDC69A6NI79 296 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 PDCP20941 246 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 SEC23AQ15436 765 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 NSUN7Q8NE18 718 aaKnown RBP28.64■■■□□ 2.17
U2AF1-204ENST00000459639 GBP4Q96PP9 640 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 ZSCAN10Q96SZ4 725 aaPredicted RBP28.64■■■□□ 2.17
U2AF1-204ENST00000459639 SENP2Q9HC62 589 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 NCOA5Q9HCD5 579 aaKnown RBP28.64■■■□□ 2.17
U2AF1-204ENST00000459639 DDX4Q9NQI0 724 aaKnown RBP28.64■■■□□ 2.17
U2AF1-204ENST00000459639 NID2Q14112 1375 aa28.64■■■□□ 2.17
U2AF1-204ENST00000459639 SYT1P21579 422 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 HMGN5P82970 282 aaKnown RBP28.63■■■□□ 2.17
U2AF1-204ENST00000459639 PICALMQ13492 652 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 C16orf86Q6ZW13 317 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 AGBL3Q8NEM8 1001 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 DYNLL2Q96FJ2 89 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 HDAC9Q9UKV0 1011 aa28.63■■■□□ 2.17
U2AF1-204ENST00000459639 STX6O43752 255 aa28.62■■■□□ 2.17
U2AF1-204ENST00000459639 RCAN1P53805 252 aa28.62■■■□□ 2.17
U2AF1-204ENST00000459639 TTC6Q86TZ1 520 aa28.62■■■□□ 2.17
U2AF1-204ENST00000459639 OSBPL5Q9H0X9 879 aaPredicted RBP28.62■■■□□ 2.17
U2AF1-204ENST00000459639 SLC12A7Q9Y666 1083 aa28.62■■■□□ 2.17
U2AF1-204ENST00000459639 ZBTB43O43298 467 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 JAK2O60674 1132 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 NPM3O75607 178 aaKnown RBP28.61■■■□□ 2.17
U2AF1-204ENST00000459639 CTDNEP1O95476 244 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 NBR1Q14596 966 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 CFAP100Q494V2 611 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 ILDR2Q71H61 639 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 IDI2Q9BXS1 227 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 METAP2P50579 478 aaKnown RBP eCLIP28.61■■■□□ 2.17
U2AF1-204ENST00000459639 CXCL9Q07325 125 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 CIAPIN1Q6FI81 312 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 SYNE3Q6ZMZ3 975 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 MKNK2Q9HBH9 465 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 PCDHAC2Q9Y5I4 1007 aa28.61■■■□□ 2.17
U2AF1-204ENST00000459639 PTPDC1A2A3K4 754 aa28.6■■■□□ 2.17
U2AF1-204ENST00000459639 TSPY2A6NKD2 308 aa28.6■■■□□ 2.17
U2AF1-204ENST00000459639 ENAHQ8N8S7 591 aaPredicted RBP28.6■■■□□ 2.17
U2AF1-204ENST00000459639 KIF3AQ9Y496 699 aa28.6■■■□□ 2.17
U2AF1-204ENST00000459639 RASSF7Q02833 373 aa28.58■■■□□ 2.17
U2AF1-204ENST00000459639 LARP1BQ659C4 914 aaKnown RBP28.58■■■□□ 2.17
U2AF1-204ENST00000459639 MICU3Q86XE3 530 aa28.58■■■□□ 2.17
U2AF1-204ENST00000459639 OGFOD1Q8N543 542 aa28.58■■■□□ 2.17
U2AF1-204ENST00000459639 FHDC1Q9C0D6 1143 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-204ENST00000459639 DICER1Q9UPY3 1922 aaKnown RBP28.58■■■□□ 2.17
U2AF1-204ENST00000459639 GOLGA8AA7E2F4 631 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 DTNBO60941 627 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 MCM4P33991 863 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 CDK8P49336 464 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 NFIAQ12857 509 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 TNIP1Q15025 636 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 FAM47AQ5JRC9 791 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 ANP32EQ9BTT0 268 aa28.58■■■□□ 2.16
U2AF1-204ENST00000459639 SIPA1L1O43166 1804 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 CPLX1O14810 134 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 ZSCAN22P10073 491 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-204ENST00000459639 RASA1P20936 1047 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 CCDC178Q5BJE1 867 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 IFIT1BQ5T764 474 aaKnown RBP28.57■■■□□ 2.16
U2AF1-204ENST00000459639 RAB11FIP4Q86YS3 637 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 ZNF654Q8IZM8 581 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 ZNF444Q8N0Y2 327 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-204ENST00000459639 SLC44A5Q8NCS7 719 aa28.57■■■□□ 2.16
U2AF1-204ENST00000459639 ZBTB12Q9Y330 459 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-204ENST00000459639 COL2A1P02458 1487 aaPredicted RBP28.56■■■□□ 2.16
U2AF1-204ENST00000459639 TFAP4Q01664 338 aa28.56■■■□□ 2.16
U2AF1-204ENST00000459639 GABPAQ06546 454 aa28.56■■■□□ 2.16
U2AF1-204ENST00000459639 FAM184AQ8NB25 1140 aa28.56■■■□□ 2.16
U2AF1-204ENST00000459639 TCP11L1Q9NUJ3 509 aa28.56■■■□□ 2.16
U2AF1-204ENST00000459639 MTMR6Q9Y217 621 aa28.56■■■□□ 2.16
U2AF1-204ENST00000459639 SPDYE2BA6NHP3 402 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms