RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 IMPDH2P12268 514 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 RLBP1P12271 317 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 CPB1P15086 417 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 SPINK2P20155 84 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 TYRO3Q06418 890 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 DDR1Q08345 913 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 SPTY2D1Q68D10 685 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 KLHL10Q6JEL2 608 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 FAM35AQ86V20 835 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 MTMR14Q8NCE2 650 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 RNF214Q8ND24 703 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 LSM14AQ8ND56 463 aaKnown RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 CCDC26Q8TAB7 109 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 CRACR2AQ9BSW2 395 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 THUMPD2Q9BTF0 503 aaKnown RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 RANBP17Q9H2T7 1088 aaKnown RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 LMBRD1Q9NUN5 540 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 ZNF446Q9NWS9 450 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 ABCF2Q9UG63 623 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
HMGB4-202ENST00000458277 FMN1Q68DA7 1419 aa6.5□□□□□ -1.37
HMGB4-202ENST00000458277 SAMD9Q5K651 1589 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 A6NNZ2 444 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 EIF3CLB5ME19 914 aaKnown RBP6.49□□□□□ -1.37
HMGB4-202ENST00000458277 NEBLO76041 1014 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 TNNT1P13805 278 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 ELF1P32519 619 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 GRIK1P39086 918 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 SF3B2Q13435 895 aaKnown RBP6.49□□□□□ -1.37
HMGB4-202ENST00000458277 SLMAPQ14BN4 828 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 GRIK5Q16478 980 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 NBPF8Q3BBV2 869 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 TUBB8Q3ZCM7 444 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 DNAJC21Q5F1R6 531 aaKnown RBP6.49□□□□□ -1.37
HMGB4-202ENST00000458277 TADA2BQ86TJ2 420 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 SPATS2Q86XZ4 545 aaKnown RBP6.49□□□□□ -1.37
HMGB4-202ENST00000458277 PLPP7Q8NBV4 271 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 ZNF280CQ8ND82 737 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 CLUAP1Q96AJ1 413 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 EIF3CQ99613 913 aaKnown RBP6.49□□□□□ -1.37
HMGB4-202ENST00000458277 TMX1Q9H3N1 280 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 INCENPQ9NQS7 918 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 STOML1Q9UBI4 398 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 DISP1Q96F81 1524 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 HFM1A2PYH4 1435 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 SPATA31E1Q6ZUB1 1445 aa6.49□□□□□ -1.37
HMGB4-202ENST00000458277 ERCC6L2Q5T890 1561 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 KDRP35968 1356 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 SERTM1A2A2V5 107 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 SNUPNO95149 360 aaKnown RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 TUBBP07437 444 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 H2AFXP16104 143 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 MRPL12P52815 198 aaKnown RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 PLAURQ03405 335 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 MLECQ14165 292 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 SART3Q15020 963 aaKnown RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 AMOTQ4VCS5 1084 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 HSP90AB2PQ58FF8 381 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 KANK4Q5T7N3 995 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 DDX46Q7L014 1031 aaKnown RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 SLC9A9Q8IVB4 645 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 APLFQ8IW19 511 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 WDR63Q8IWG1 891 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 RBM12BQ8IXT5 1001 aaKnown RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 DRAXINQ8NBI3 349 aaPredicted RBP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
HMGB4-202ENST00000458277 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 BORCS6Q96GS4 357 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 PNMA5Q96PV4 448 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 IRAK4Q9NWZ3 460 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 ANKIB1Q9P2G1 1089 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 RPS6KL1Q9Y6S9 549 aa6.48□□□□□ -1.37
HMGB4-202ENST00000458277 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 KDM5BQ9UGL1 1544 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-202ENST00000458277 DLL1O00548 723 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 CHUKO15111 745 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ERLIN1O75477 346 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 SASH1O94885 1247 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ERLIN2O94905 339 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ADCY5O95622 1261 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 CAVIN2O95810 425 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 PECAM1P16284 738 aaPredicted RBP6.47□□□□□ -1.37
HMGB4-202ENST00000458277 POLD1P28340 1107 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 SLC8A3P57103 927 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 RBM6P78332 1123 aaKnown RBP6.47□□□□□ -1.37
HMGB4-202ENST00000458277 GRIK3Q13003 919 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 PDIA5Q14554 519 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 MAP7D1Q3KQU3 841 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 CCDC38Q502W7 563 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 DTNBP1Q96EV8 351 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 KIF2CQ99661 725 aa6.47□□□□□ -1.37
HMGB4-202ENST00000458277 MMTAG2Q9BU76 263 aaKnown RBP6.47□□□□□ -1.37
HMGB4-202ENST00000458277 ZSCAN16Q9H4T2 348 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms