RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
HDAC4-205ENST00000454542 EHD4Q9H223 541 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
HDAC4-205ENST00000454542 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
HDAC4-205ENST00000454542 MANSC4A6NHS7 340 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-205ENST00000454542 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
HDAC4-205ENST00000454542 USP5P45974 858 aa17.1■□□□□ 0.33
HDAC4-205ENST00000454542 PPIL2Q13356 520 aa17.1■□□□□ 0.33
HDAC4-205ENST00000454542 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
HDAC4-205ENST00000454542 ARMT1Q9H993 441 aa17.1■□□□□ 0.33
HDAC4-205ENST00000454542 LOC285556D6RIA3 1793 aa17.1■□□□□ 0.33
HDAC4-205ENST00000454542 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 PDE4AP27815 886 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-205ENST00000454542 PPATQ06203 517 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
HDAC4-205ENST00000454542 TICAM2Q86XR7 235 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 SDR42E1Q8WUS8 393 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 OSBP2Q969R2 916 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 MS4A4AQ96JQ5 239 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
HDAC4-205ENST00000454542 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
HDAC4-205ENST00000454542 CTNND1O60716 968 aaKnown RBP17.08■□□□□ 0.32
HDAC4-205ENST00000454542 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
HDAC4-205ENST00000454542 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.32
HDAC4-205ENST00000454542 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.32
HDAC4-205ENST00000454542 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
HDAC4-205ENST00000454542 OTUD5Q96G74 571 aa17.08■□□□□ 0.32
HDAC4-205ENST00000454542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC4-205ENST00000454542 ATP8A2Q9NTI2 1148 aa17.08■□□□□ 0.32
HDAC4-205ENST00000454542 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
HDAC4-205ENST00000454542 KCNH4Q9UQ05 1017 aa17.08■□□□□ 0.32
HDAC4-205ENST00000454542 INHBEP58166 350 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 GABPAQ06546 454 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 ZMYM1Q5SVZ6 1142 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
HDAC4-205ENST00000454542 FSD1Q9BTV5 496 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 RNF186Q9NXI6 227 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 TAOK2Q9UL54 1235 aa17.07■□□□□ 0.32
HDAC4-205ENST00000454542 M0R2C6 588 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDAC4-205ENST00000454542 IRF6O14896 467 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 PRKAB2O43741 272 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 PTPRAP18433 802 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 GTF2A2P52657 109 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 BRI3BPQ8WY22 251 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
HDAC4-205ENST00000454542 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 SERPINB13Q9UIV8 391 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 MYH8P13535 1937 aa17.06■□□□□ 0.32
HDAC4-205ENST00000454542 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 GPAA1O43292 621 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 CAP2P40123 477 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 TTC6Q86TZ1 520 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 PTPN18Q99952 460 aa17.05■□□□□ 0.32
HDAC4-205ENST00000454542 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
HDAC4-205ENST00000454542 PLCD1P51178 756 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 EVX2Q03828 476 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 MOGSQ13724 837 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 NOM1Q5C9Z4 860 aaKnown RBP17.04■□□□□ 0.32
HDAC4-205ENST00000454542 GIMAP6Q6P9H5 292 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 EPB41L4AQ9HCS5 686 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-205ENST00000454542 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
HDAC4-205ENST00000454542 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 GSG1L2A8MUP6 293 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 CXCL11O14625 94 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 ALDH1A1P00352 501 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 SHMT1P34896 483 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 LBX1P52954 281 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 CCL15Q16663 113 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 SLC4A8Q2Y0W8 1093 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 CRACR2BQ8N4Y2 399 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-205ENST00000454542 SEC62Q99442 399 aaKnown RBP17.03■□□□□ 0.32
HDAC4-205ENST00000454542 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 ZCCHC17Q9NP64 241 aaKnown RBP17.03■□□□□ 0.32
HDAC4-205ENST00000454542 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-205ENST00000454542 AFG3L2Q9Y4W6 797 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 SLC4A4Q9Y6R1 1079 aa17.03■□□□□ 0.32
HDAC4-205ENST00000454542 A0A0G2JLL6 359 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-205ENST00000454542 FOXP2O15409 715 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 TRPA1O75762 1119 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 CYP2D6P10635 497 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 CETPP11597 493 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 GSPT1P15170 499 aaKnown RBP17.02■□□□□ 0.32
HDAC4-205ENST00000454542 GNAT2P19087 354 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 JAG1P78504 1218 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 C12orf60Q5U649 245 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 PRRT2Q7Z6L0 340 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-205ENST00000454542 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-205ENST00000454542 ARPP21Q9UBL0 812 aaPredicted RBP17.02■□□□□ 0.32
HDAC4-205ENST00000454542 TSKSQ9UJT2 592 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 ZBTB21Q9ULJ3 1066 aa17.02■□□□□ 0.32
HDAC4-205ENST00000454542 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms