RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 FLT1P17948 1338 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 USP5P45974 858 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 DYNLL1P63167 89 aaKnown RBP12.98□□□□□ -0.33
DDX39A-203ENST00000454233 MLLT1Q03111 559 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-203ENST00000454233 CRACR2BQ8N4Y2 399 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-203ENST00000454233 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 DNAJC2Q99543 621 aaKnown RBP12.98□□□□□ -0.33
DDX39A-203ENST00000454233 LRRCC1Q9C099 1032 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 AFG3L2Q9Y4W6 797 aa12.98□□□□□ -0.33
DDX39A-203ENST00000454233 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 A0A0G2JLL6 359 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-203ENST00000454233 TRIM75PA6NK02 468 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 GOLIM4O00461 696 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 CAP2P40123 477 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 SOX10P56693 466 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 GADL1Q6ZQY3 521 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 PRRT2Q7Z6L0 340 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-203ENST00000454233 FOXP4Q8IVH2 680 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-203ENST00000454233 PARK7Q99497 189 aaKnown RBP12.97□□□□□ -0.33
DDX39A-203ENST00000454233 TBC1D2Q9BYX2 928 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 PTPN22Q9Y2R2 807 aa12.97□□□□□ -0.33
DDX39A-203ENST00000454233 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
DDX39A-203ENST00000454233 MOGSQ13724 837 aa12.96□□□□□ -0.33
DDX39A-203ENST00000454233 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
DDX39A-203ENST00000454233 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
DDX39A-203ENST00000454233 SAP30BPQ9UHR5 308 aaKnown RBP12.96□□□□□ -0.33
DDX39A-203ENST00000454233 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
DDX39A-203ENST00000454233 PALD1Q9ULE6 856 aa12.96□□□□□ -0.33
DDX39A-203ENST00000454233 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 USP17L5A8MUK1 530 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 PDE6AP16499 860 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 ATP5JP18859 108 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 GPAT2Q6NUI2 795 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 CCDC84Q86UT8 332 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-203ENST00000454233 ZNF280CQ8ND82 737 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 BOLA2Q9H3K6 86 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 AS3MTQ9HBK9 375 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 PAG1Q9NWQ8 432 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-203ENST00000454233 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 FOCADQ5VW36 1801 aa12.95□□□□□ -0.34
DDX39A-203ENST00000454233 CDK5RAP2Q96SN8 1893 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 SMARCA5O60264 1052 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-203ENST00000454233 GNRH1P01148 92 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 ASNSP08243 561 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 RRP1P56182 461 aaKnown RBP12.94□□□□□ -0.34
DDX39A-203ENST00000454233 SPP2Q13103 211 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 METTL16Q86W50 562 aaKnown RBP12.94□□□□□ -0.34
DDX39A-203ENST00000454233 PROCA1Q8NCQ7 364 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-203ENST00000454233 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
DDX39A-203ENST00000454233 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.94□□□□□ -0.345e-8■■■□□ 17.6
DDX39A-203ENST00000454233 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 AGTPBP1Q9UPW5 1226 aa12.94□□□□□ -0.34
DDX39A-203ENST00000454233 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 ZNF532Q9HCE3 1301 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 CYP2C8P10632 490 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 PRMT2P55345 433 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 CAP1Q01518 475 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 RRP1BQ14684 758 aaKnown RBP12.93□□□□□ -0.34
DDX39A-203ENST00000454233 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-203ENST00000454233 EDC3Q96F86 508 aaKnown RBP12.93□□□□□ -0.34
DDX39A-203ENST00000454233 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 HAUS7Q99871 368 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 RIOK1Q9BRS2 568 aaKnown RBP12.93□□□□□ -0.34
DDX39A-203ENST00000454233 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 DNAJC18Q9H819 358 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
DDX39A-203ENST00000454233 PHIPQ8WWQ0 1821 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-203ENST00000454233 GDF11O95390 407 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-203ENST00000454233 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-203ENST00000454233 HOXD10P28358 340 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 PSMC4P43686 418 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 HMGCS2P54868 508 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 PABPC4Q13310 644 aaKnown RBP eCLIP12.92□□□□□ -0.34
DDX39A-203ENST00000454233 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 WDR18Q9BV38 432 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 ARHGAP39Q9C0H5 1083 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 EHD4Q9H223 541 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 SERPINB13Q9UIV8 391 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 PTCH2Q9Y6C5 1203 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 PTPRFP10586 1907 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 MYH1P12882 1939 aa12.92□□□□□ -0.34
DDX39A-203ENST00000454233 TCRBV5S4A2TA0A5A2 114 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 BCRP11274 1271 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 ADD2P35612 726 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 ARMC5Q96C12 935 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 TMOD4Q9NZQ9 345 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
DDX39A-203ENST00000454233 C19orf81C9J6K1 198 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms