RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 FOCADQ5VW36 1801 aa13.4□□□□□ -0.26
RPE-214ENST00000452025 PFASO15067 1338 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 RPTORQ8N122 1335 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 TRIB2Q92519 343 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 UBE2OQ9C0C9 1292 aaKnown RBP13.39□□□□□ -0.27
RPE-214ENST00000452025 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
RPE-214ENST00000452025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPE-214ENST00000452025 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
RPE-214ENST00000452025 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
RPE-214ENST00000452025 CIAO1O76071 339 aa13.38□□□□□ -0.27
RPE-214ENST00000452025 GCLCP48506 637 aaPredicted RBP13.38□□□□□ -0.27
RPE-214ENST00000452025 MAP3K10Q02779 954 aa13.38□□□□□ -0.27
RPE-214ENST00000452025 SPP2Q13103 211 aa13.38□□□□□ -0.27
RPE-214ENST00000452025 CCDC102BQ68D86 513 aa13.38□□□□□ -0.27
RPE-214ENST00000452025 SLF2Q8IX21 1173 aa13.38□□□□□ -0.27
RPE-214ENST00000452025 PA2G4Q9UQ80 394 aaKnown RBP13.38□□□□□ -0.27
RPE-214ENST00000452025 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
RPE-214ENST00000452025 CYP2B6P20813 491 aa13.37□□□□□ -0.27
RPE-214ENST00000452025 PABPC4Q13310 644 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPE-214ENST00000452025 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
RPE-214ENST00000452025 SSH1Q8WYL5 1049 aa13.37□□□□□ -0.27
RPE-214ENST00000452025 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
RPE-214ENST00000452025 PEX10O60683 326 aa13.36□□□□□ -0.27
RPE-214ENST00000452025 UBTFL1P0CB47 393 aaPredicted RBP13.36□□□□□ -0.27
RPE-214ENST00000452025 RHBDL3P58872 404 aa13.36□□□□□ -0.27
RPE-214ENST00000452025 IRX3P78415 501 aaPredicted RBP13.36□□□□□ -0.27
RPE-214ENST00000452025 MECOMQ03112 1051 aa13.36□□□□□ -0.27
RPE-214ENST00000452025 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
RPE-214ENST00000452025 GJD2Q9UKL4 321 aa13.36□□□□□ -0.27
RPE-214ENST00000452025 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
RPE-214ENST00000452025 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
RPE-214ENST00000452025 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
RPE-214ENST00000452025 LAMA2P24043 3122 aaKnown RBP13.35□□□□□ -0.27
RPE-214ENST00000452025 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
RPE-214ENST00000452025 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
RPE-214ENST00000452025 MDM2Q00987 491 aaPredicted RBP13.35□□□□□ -0.27
RPE-214ENST00000452025 MTMR2Q13614 643 aa13.35□□□□□ -0.27
RPE-214ENST00000452025 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
RPE-214ENST00000452025 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
RPE-214ENST00000452025 SOCS4Q8WXH5 440 aa13.35□□□□□ -0.27
RPE-214ENST00000452025 MORF4L1Q9UBU8 362 aa13.35□□□□□ -0.27
RPE-214ENST00000452025 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
RPE-214ENST00000452025 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 TBC1D12O60347 775 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 RRP1BQ14684 758 aaKnown RBP13.34□□□□□ -0.27
RPE-214ENST00000452025 LRRC26Q2I0M4 334 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 MAP3K21Q5TCX8 1036 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 ERICH6Q7L0X2 663 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
RPE-214ENST00000452025 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 ZNF521Q96K83 1311 aa13.34□□□□□ -0.27
RPE-214ENST00000452025 GPR75-ASB3A0A0A6YYF3 556 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 CAP2P40123 477 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 SH3D19Q5HYK7 790 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 PI16Q6UXB8 463 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
RPE-214ENST00000452025 FAM161BQ96MY7 647 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 NUDT12Q9BQG2 462 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 TXNRD2Q9NNW7 524 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 MYH1P12882 1939 aa13.33□□□□□ -0.28
RPE-214ENST00000452025 EYSQ5T1H1 3165 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 A0A1B0GUL7 405 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 ANP32CO43423 234 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
RPE-214ENST00000452025 TIMM10P62072 90 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 HERVK_113P62684 666 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
RPE-214ENST00000452025 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
RPE-214ENST00000452025 CCL14Q16627 93 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
RPE-214ENST00000452025 TEX11Q8IYF3 940 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 GUCD1Q96NT3 240 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 PAGR1Q9BTK6 254 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 TMOD4Q9NZQ9 345 aa13.32□□□□□ -0.28
RPE-214ENST00000452025 ZBTB22O15209 634 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 COL6A1P12109 1028 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 APBA2Q99767 749 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 PORCNQ9H237 461 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
RPE-214ENST00000452025 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 RLFQ13129 1914 aa13.31□□□□□ -0.28
RPE-214ENST00000452025 NPM3O75607 178 aaKnown RBP13.3□□□□□ -0.28
RPE-214ENST00000452025 GDF11O95390 407 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 MAPK4P31152 587 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 ERVK-24P63145 666 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 GSTO1P78417 241 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 TFCP2Q12800 502 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
RPE-214ENST00000452025 GPRC5AQ8NFJ5 357 aa13.3□□□□□ -0.28
RPE-214ENST00000452025 SH3RF3Q8TEJ3 882 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms