RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 ZNF280CQ8ND82 737 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 SIL1Q9H173 461 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 ASCC2Q9H1I8 757 aaPredicted RBP17.05■□□□□ 0.32
CPSF7-207ENST00000449811 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.05■□□□□ 0.32
CPSF7-207ENST00000449811 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
CPSF7-207ENST00000449811 PTPRCP08575 1304 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 VCANP13611 3396 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 FAM196BA6NMK8 535 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
CPSF7-207ENST00000449811 FAM163AQ96GL9 167 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-207ENST00000449811 TBC1D2Q9BYX2 928 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 OSBPL5Q9H0X9 879 aaPredicted RBP17.04■□□□□ 0.32
CPSF7-207ENST00000449811 ABCF2Q9UG63 623 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
CPSF7-207ENST00000449811 LAMA2P24043 3122 aaKnown RBP17.04■□□□□ 0.32
CPSF7-207ENST00000449811 CIAO1O76071 339 aa17.03■□□□□ 0.32
CPSF7-207ENST00000449811 MDM2Q00987 491 aaPredicted RBP17.03■□□□□ 0.32
CPSF7-207ENST00000449811 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 ZBTB22O15209 634 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 COL6A1P12109 1028 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 ADORA1P30542 326 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 CCDC102BQ68D86 513 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 GUCD1Q96NT3 240 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 NUDT12Q9BQG2 462 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 MORF4L1Q9UBU8 362 aa17.02■□□□□ 0.32
CPSF7-207ENST00000449811 EYSQ5T1H1 3165 aa17.02■□□□□ 0.31
CPSF7-207ENST00000449811 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
CPSF7-207ENST00000449811 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
CPSF7-207ENST00000449811 XRCC5P13010 732 aaKnown RBP17.01■□□□□ 0.31
CPSF7-207ENST00000449811 RHBDL3P58872 404 aa17.01■□□□□ 0.31
CPSF7-207ENST00000449811 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-207ENST00000449811 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
CPSF7-207ENST00000449811 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
CPSF7-207ENST00000449811 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-207ENST00000449811 FAM109BQ6ICB4 259 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-207ENST00000449811 PLXNB2O15031 1838 aa17■□□□□ 0.31
CPSF7-207ENST00000449811 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
CPSF7-207ENST00000449811 GPR75-ASB3A0A0A6YYF3 556 aa17■□□□□ 0.31
CPSF7-207ENST00000449811 USP17L5A8MUK1 530 aa17■□□□□ 0.31
CPSF7-207ENST00000449811 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
CPSF7-207ENST00000449811 CAP2P40123 477 aa17■□□□□ 0.31
CPSF7-207ENST00000449811 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
CPSF7-207ENST00000449811 TRMT44Q8IYL2 757 aaKnown RBP17■□□□□ 0.31
CPSF7-207ENST00000449811 AS3MTQ9HBK9 375 aa17■□□□□ 0.31
CPSF7-207ENST00000449811 MECOMQ03112 1051 aa16.99■□□□□ 0.31
CPSF7-207ENST00000449811 CACNB2Q08289 660 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-207ENST00000449811 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
CPSF7-207ENST00000449811 RRP1BQ14684 758 aaKnown RBP16.99■□□□□ 0.31
CPSF7-207ENST00000449811 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
CPSF7-207ENST00000449811 GPRC5AQ8NFJ5 357 aa16.99■□□□□ 0.31
CPSF7-207ENST00000449811 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
CPSF7-207ENST00000449811 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
CPSF7-207ENST00000449811 PEX10O60683 326 aa16.98■□□□□ 0.31
CPSF7-207ENST00000449811 MTMR2Q13614 643 aa16.98■□□□□ 0.31
CPSF7-207ENST00000449811 LHX8Q68G74 356 aa16.98■□□□□ 0.31
CPSF7-207ENST00000449811 P2RX7Q99572 595 aaKnown RBP16.98■□□□□ 0.31
CPSF7-207ENST00000449811 LBHD1Q9BQE6 289 aaPredicted RBP16.98■□□□□ 0.31
CPSF7-207ENST00000449811 TMOD4Q9NZQ9 345 aa16.98■□□□□ 0.31
CPSF7-207ENST00000449811 DNAH12Q6ZR08 3092 aa16.98■□□□□ 0.31
CPSF7-207ENST00000449811 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-207ENST00000449811 CCND3P30281 292 aaPredicted RBP16.97■□□□□ 0.31
CPSF7-207ENST00000449811 MAPK4P31152 587 aa16.97■□□□□ 0.31
CPSF7-207ENST00000449811 HERVK_113P62684 666 aa16.97■□□□□ 0.31
CPSF7-207ENST00000449811 ZNF697Q5TEC3 545 aa16.97■□□□□ 0.31
CPSF7-207ENST00000449811 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
CPSF7-207ENST00000449811 TXNRD2Q9NNW7 524 aa16.97■□□□□ 0.31
CPSF7-207ENST00000449811 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
CPSF7-207ENST00000449811 ATAD5Q96QE3 1844 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-207ENST00000449811 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-207ENST00000449811 RGS2P41220 211 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 TIMM10P62072 90 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 CCL14Q16627 93 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 USP6NLQ92738 828 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 WDR18Q9BV38 432 aa16.96■□□□□ 0.31
CPSF7-207ENST00000449811 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
CPSF7-207ENST00000449811 SPTBN5Q9NRC6 3674 aaKnown RBP16.95■□□□□ 0.3
CPSF7-207ENST00000449811 LDHCP07864 332 aa16.95■□□□□ 0.3
CPSF7-207ENST00000449811 BACE1P56817 501 aa16.95■□□□□ 0.3
CPSF7-207ENST00000449811 GSTO1P78417 241 aa16.95■□□□□ 0.3
CPSF7-207ENST00000449811 APBA2Q99767 749 aa16.95■□□□□ 0.3
CPSF7-207ENST00000449811 ASNSP08243 561 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 ERVK-9P63128 1117 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 ERVK-24P63145 666 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 MORN1Q5T089 497 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 GPR142Q7Z601 462 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
CPSF7-207ENST00000449811 XAGE2Q96GT9 111 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 SENP6Q9GZR1 1112 aaPredicted RBP16.94■□□□□ 0.3
CPSF7-207ENST00000449811 PORCNQ9H237 461 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
CPSF7-207ENST00000449811 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms