RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 OSBPL3Q9H4L5 887 aa18.91■□□□□ 0.62
TOP3B-211ENST00000449704 MCM9Q9NXL9 1143 aa18.91■□□□□ 0.62
TOP3B-211ENST00000449704 SLC4A4Q9Y6R1 1079 aa18.91■□□□□ 0.62
TOP3B-211ENST00000449704 DOCK2Q92608 1830 aa18.9■□□□□ 0.62
TOP3B-211ENST00000449704 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
TOP3B-211ENST00000449704 ERO1BQ86YB8 467 aa18.9■□□□□ 0.62
TOP3B-211ENST00000449704 FOXP4Q8IVH2 680 aaPredicted RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 REM2Q8IYK8 340 aaPredicted RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 STRBPQ96SI9 672 aaKnown RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 DCP1AQ9NPI6 582 aaPredicted RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
TOP3B-211ENST00000449704 HERC5Q9UII4 1024 aaKnown RBP18.9■□□□□ 0.62
TOP3B-211ENST00000449704 PCNTO95613 3336 aa18.89■□□□□ 0.62
TOP3B-211ENST00000449704 MANSC4A6NHS7 340 aaPredicted RBP18.89■□□□□ 0.61
TOP3B-211ENST00000449704 SPDYE5A6NIY4 337 aa18.89■□□□□ 0.61
TOP3B-211ENST00000449704 FOXN1O15353 648 aa18.89■□□□□ 0.61
TOP3B-211ENST00000449704 CTNND1O60716 968 aaKnown RBP18.89■□□□□ 0.61
TOP3B-211ENST00000449704 NOL9Q5SY16 702 aaKnown RBP18.89■□□□□ 0.61
TOP3B-211ENST00000449704 SCYL3Q8IZE3 742 aa18.89■□□□□ 0.61
TOP3B-211ENST00000449704 ATP8A2Q9NTI2 1148 aa18.89■□□□□ 0.61
TOP3B-211ENST00000449704 AK9Q5TCS8 1911 aa18.89■□□□□ 0.61
TOP3B-211ENST00000449704 M0R2C6 588 aa18.88■□□□□ 0.61
TOP3B-211ENST00000449704 SREBF2Q12772 1141 aa18.88■□□□□ 0.61
TOP3B-211ENST00000449704 DDRGK1Q96HY6 314 aa18.88■□□□□ 0.61
TOP3B-211ENST00000449704 CCDC136Q96JN2 1154 aa18.88■□□□□ 0.61
TOP3B-211ENST00000449704 SEC62Q99442 399 aaKnown RBP18.88■□□□□ 0.61
TOP3B-211ENST00000449704 GPAA1O43292 621 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 TRPA1O75762 1119 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 CYP2D6P10635 497 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 PLCD1P51178 756 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 ZMYM1Q5SVZ6 1142 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 CENPQQ7L2Z9 268 aaPredicted RBP18.87■□□□□ 0.61
TOP3B-211ENST00000449704 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
TOP3B-211ENST00000449704 IRF6O14896 467 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 CA12O43570 354 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 APPP05067 770 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 PTPRAP18433 802 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 TM4SF4P48230 202 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-211ENST00000449704 PPATQ06203 517 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 PPIL2Q13356 520 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
TOP3B-211ENST00000449704 DNAJC18Q9H819 358 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 RNF186Q9NXI6 227 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 SERPINB13Q9UIV8 391 aa18.86■□□□□ 0.61
TOP3B-211ENST00000449704 CAP2P40123 477 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 GTF2A2P52657 109 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 INHBEP58166 350 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 RRP1BQ14684 758 aaKnown RBP18.85■□□□□ 0.61
TOP3B-211ENST00000449704 AMOTL1Q8IY63 956 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 EHD4Q9H223 541 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
TOP3B-211ENST00000449704 ZHX2Q9Y6X8 837 aa18.85■□□□□ 0.61
TOP3B-211ENST00000449704 CCL15-CCL14A0A0B4J2E2 113 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 GSG1L2A8MUP6 293 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 USP17L12C9JPN9 530 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 USP17L21D6R901 530 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 GDF11O95390 407 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 GNAT2P19087 354 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 EVX2Q03828 476 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 SNAPC2Q13487 334 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 CCL15Q16663 113 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 CCDC129Q6ZRS4 1044 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 CCDC84Q86UT8 332 aaPredicted RBP18.84■□□□□ 0.61
TOP3B-211ENST00000449704 MS4A4AQ96JQ5 239 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 THSD7BQ9C0I4 1608 aa18.84■□□□□ 0.61
TOP3B-211ENST00000449704 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 PATL2C9JE40 543 aaKnown RBP18.83■□□□□ 0.6
TOP3B-211ENST00000449704 HSPA8P11142 646 aaKnown RBP18.83■□□□□ 0.6
TOP3B-211ENST00000449704 LBX1P52954 281 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 TTC22Q5TAA0 569 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 OTUD7BQ6GQQ9 843 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 IFNL1Q8IU54 200 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 BRI3BPQ8WY22 251 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 FAM227BQ96M60 508 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 HELLSQ9NRZ9 838 aa18.83■□□□□ 0.6
TOP3B-211ENST00000449704 IGF2BP3O00425 579 aaKnown RBP eCLIP18.82■□□□□ 0.6
TOP3B-211ENST00000449704 CETPP11597 493 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 SDSP20132 328 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 TDO2P48775 406 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 NMIQ13287 307 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-211ENST00000449704 CERKLQ49MI3 558 aaPredicted RBP18.82■□□□□ 0.6
TOP3B-211ENST00000449704 TICAM2Q86XR7 235 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 DYNLL2Q96FJ2 89 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 PTPN18Q99952 460 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 SAGE1Q9NXZ1 904 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 KCNH4Q9UQ05 1017 aa18.82■□□□□ 0.6
TOP3B-211ENST00000449704 A0A0D9SFI3 127 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 TESPA1A2RU30 521 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-211ENST00000449704 TRIM75PA6NK02 468 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 TBC1D8O95759 1140 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 SHMT1P34896 483 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 GABPAQ06546 454 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 SHROOM1Q2M3G4 852 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-211ENST00000449704 MCMDC2Q4G0Z9 681 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 C12orf60Q5U649 245 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 TATDN1Q6P1N9 297 aa18.81■□□□□ 0.6
TOP3B-211ENST00000449704 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms