RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 CHGBP05060 677 aa6.91□□□□□ -1.3
PROM1-201ENST00000447510 CALCOCO1Q9P1Z2 691 aa6.91□□□□□ -1.3
PROM1-201ENST00000447510 ZNF541Q9H0D2 1346 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 TAF1P21675 1872 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 M0R2C6 588 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 PRKAB2O43741 272 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 PDE4BQ07343 736 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 CERS5Q8N5B7 392 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 SH3RF3Q8TEJ3 882 aaPredicted RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 RBM8AQ9Y5S9 174 aaKnown RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 SLX4Q8IY92 1834 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 PATL2C9JE40 543 aaKnown RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 PSMA5P28066 241 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 EPS15P42566 896 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 SART3Q15020 963 aaKnown RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 GRIK5Q16478 980 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 SAMD1Q6SPF0 538 aaPredicted RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 CCDC112Q8NEF3 446 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 RNF41Q9H4P4 317 aaPredicted RBP6.9□□□□□ -1.3
PROM1-201ENST00000447510 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 SERPINA10Q9UK55 444 aa6.9□□□□□ -1.3
PROM1-201ENST00000447510 COL24A1Q17RW2 1714 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 USP17L12C9JPN9 530 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 USP17L21D6R901 530 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 VEGFAP15692 232 aaPredicted RBP6.9□□□□□ -1.31
PROM1-201ENST00000447510 EPHX2P34913 555 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 DDIT3P35638 169 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 RABEP1Q15276 862 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 HHIPL2Q6UWX4 724 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 SYNE3Q6ZMZ3 975 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 MFSD6Q6ZSS7 791 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 DPF2Q92785 391 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 SALL3Q9BXA9 1300 aa6.9□□□□□ -1.31
PROM1-201ENST00000447510 GLTPD2A6NH11 291 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 TPD52L1Q16890 204 aaPredicted RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 PRMT6Q96LA8 375 aaPredicted RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 JAKMIP1Q96N16 626 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 FEZ1Q99689 392 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 CABP5Q9NP86 173 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 ADARB2Q9NS39 739 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 PYCARDQ9ULZ3 195 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 SCAF8Q9UPN6 1271 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 PDS5AQ29RF7 1337 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 GOLGA6L6A8MZA4 724 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 FZD9O00144 591 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 POLR3GO15318 223 aaPredicted RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 NEK4P51957 841 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 TMED8Q6PL24 325 aaPredicted RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 ZNF589Q86UQ0 364 aaPredicted RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 UBAC1Q9BSL1 405 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 SALL1Q9NSC2 1324 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 DDX60Q8IY21 1712 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 TSPY2A6NKD2 308 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 HSPD1P10809 573 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 GRM1Q13255 1194 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 KRT32Q14532 448 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 KRT26Q7Z3Y9 468 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 KRT222Q8N1A0 295 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 GPATCH11Q8N954 259 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 STRBPQ96SI9 672 aaKnown RBP6.89□□□□□ -1.31
PROM1-201ENST00000447510 ATP8A2Q9NTI2 1148 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 GGA3Q9NZ52 723 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 GPRC5DQ9NZD1 345 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 PALD1Q9ULE6 856 aa6.89□□□□□ -1.31
PROM1-201ENST00000447510 FIBPO43427 364 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 TNNT1P13805 278 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 YY1P25490 414 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 FKBP1AP62942 108 aaKnown RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 CDC42EP5Q6NZY7 148 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 HOOK2Q96ED9 719 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 CSRNP1Q96S65 589 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 ST7Q9NRC1 585 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 N4BP2Q86UW6 1770 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 DTNBO60941 627 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 PRDM1O75626 825 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 GABPB1Q06547 395 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 VPS53Q5VIR6 699 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 BLOC1S2Q6QNY1 142 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 ZNF70Q9UC06 446 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 GPR75-ASB3A0A0A6YYF3 556 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 SPDYE2BA6NHP3 402 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 FGAP02671 866 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 SPDYE6P0CI01 402 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 PTH1RQ03431 593 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 CTDSPL2Q05D32 466 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 SUPT20HL1Q3ZLR7 823 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 APOBEC3FQ8IUX4 373 aaKnown RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 GTF3C6Q969F1 213 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 ZDHHC15Q96MV8 337 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 ARPP21Q9UBL0 812 aaPredicted RBP6.88□□□□□ -1.31
PROM1-201ENST00000447510 CYP46A1Q9Y6A2 500 aa6.88□□□□□ -1.31
PROM1-201ENST00000447510 SHTN1A0MZ66 631 aa6.87□□□□□ -1.31
PROM1-201ENST00000447510 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms