RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ADAM30Q9UKF2 790 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 AP4E1Q9UPM8 1137 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
HMGB1P16-201ENST00000447155 PRAMEF27A3QJZ7 478 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 APBA3O96018 575 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 PLCG1P19174 1290 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 COL8A1P27658 744 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 GRK4P32298 578 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 TNNI3KQ59H18 835 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 TMEM201Q5SNT2 666 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 ZBTB37Q5TC79 503 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 NBPF6Q5VWK0 638 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 C12orf50Q8NA57 414 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 RNF214Q8ND24 703 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 NBPF4Q96M43 638 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 DISC1Q9NRI5 854 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 PRKAG3Q9UGI9 489 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 USP21Q9UK80 565 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 CORINQ9Y5Q5 1042 aa6.68□□□□□ -1.34
HMGB1P16-201ENST00000447155 MEIS3P2A8K0S8 358 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 PGRP06401 933 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 ETF1P62495 437 aaKnown RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 Q6ZS46 218 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 DYMQ7RTS9 669 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 LSRQ86X29 649 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 AGGF1Q8N302 714 aaeCLIP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 CEP41Q9BYV8 373 aa6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P16-201ENST00000447155 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 SMAD7O15105 426 aaKnown RBP6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 DRD2P14416 443 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 DPH6Q7L8W6 267 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 C2CD4AQ8NCU7 369 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 PMFBP1Q8TBY8 1022 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 ZNF507Q8TCN5 953 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 TMEM40Q8WWA1 233 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 LNPKQ9C0E8 428 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 GMIPQ9P107 970 aa6.66□□□□□ -1.34
HMGB1P16-201ENST00000447155 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ALX3O95076 343 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 GLB1P16278 677 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 NTF4P34130 210 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ASPAP45381 313 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 PREPP48147 710 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 TTLL4Q14679 1199 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 HID1Q8IV36 788 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 C19orf47Q8N9M1 422 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 WFDC12Q8WWY7 111 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 R3HCC1Q9Y3T6 440 aaKnown RBP6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.34
HMGB1P16-201ENST00000447155 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLC22A31A6NKX4 558 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 KLF4O43474 513 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 GAS2O43903 313 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 NEFMP07197 916 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 NOS3P29474 1203 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 IREB2P48200 963 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 CASP7P55210 303 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ADGRE1Q14246 886 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 MBTPS1Q14703 1052 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 OVOS1Q6IE37 1185 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 CDC37L1Q7L3B6 337 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 MCATQ8IVS2 390 aaKnown RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TAB3Q8N5C8 712 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACSF2Q96CM8 615 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TM9SF2Q99805 663 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 ANTXR1Q9H6X2 564 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 TJP2Q9UDY2 1190 aa6.64□□□□□ -1.35
HMGB1P16-201ENST00000447155 RNF225M0QZC1 329 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 RNGTTO60942 597 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CAP2P40123 477 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 RAB33AQ14088 237 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 UVSSAQ2YD98 709 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CDCP2Q5VXM1 449 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 INTS3Q68E01 1043 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 MRPL41Q8IXM3 137 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SMYD4Q8IYR2 804 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ISL2Q96A47 359 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ATG4CQ96DT6 458 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 FAM46AQ96IP4 442 aaKnown RBP6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 TMEM87BQ96K49 555 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 TRIM55Q9BYV6 548 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 OSBPL2Q9H1P3 480 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 CNNM2Q9H8M5 875 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 ACTR10Q9NZ32 417 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SIRPGQ9P1W8 387 aa6.63□□□□□ -1.35
HMGB1P16-201ENST00000447155 SHROOM4Q9ULL8 1493 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 U2SURPO15042 1029 aaKnown RBP6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 DNAJA2O60884 412 aa6.62□□□□□ -1.35
HMGB1P16-201ENST00000447155 NME1P15531 152 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms