RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
ERCC3-203ENST00000445889 NAPBQ9H115 298 aa16.28■□□□□ 0.2
ERCC3-203ENST00000445889 TBC1D8O95759 1140 aa16.27■□□□□ 0.2
ERCC3-203ENST00000445889 SPECC1LQ69YQ0 1117 aa16.27■□□□□ 0.2
ERCC3-203ENST00000445889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
ERCC3-203ENST00000445889 STRBPQ96SI9 672 aaKnown RBP16.27■□□□□ 0.2
ERCC3-203ENST00000445889 PRDM11Q9NQV5 511 aa16.27■□□□□ 0.2
ERCC3-203ENST00000445889 PRDM1O75626 825 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 OAS2P29728 719 aaKnown RBP16.27■□□□□ 0.19
ERCC3-203ENST00000445889 WWC2Q6AWC2 1192 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 SMARCE1Q969G3 411 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 CSRNP2Q9H175 543 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 ATG3Q9NT62 314 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 NWD2Q9ULI1 1742 aa16.27■□□□□ 0.19
ERCC3-203ENST00000445889 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
ERCC3-203ENST00000445889 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
ERCC3-203ENST00000445889 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.26■□□□□ 0.19
ERCC3-203ENST00000445889 CALCOCO1Q9P1Z2 691 aa16.26■□□□□ 0.19
ERCC3-203ENST00000445889 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
ERCC3-203ENST00000445889 NOM1Q5C9Z4 860 aaKnown RBP16.26■□□□□ 0.19
ERCC3-203ENST00000445889 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
ERCC3-203ENST00000445889 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
ERCC3-203ENST00000445889 A0A087X0B3 334 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 MAP3K9P80192 1104 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 EARS2Q5JPH6 523 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 A0A0G2JS52 829 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 WNT7AO00755 349 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 TUBB4AP04350 444 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 ZBTB38Q8NAP3 1195 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 CD44P16070 742 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 CDC25AP30304 524 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 RBL2Q08999 1139 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 TBX2Q13207 712 aaPredicted RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 MCM6Q14566 821 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 RAD9BQ6WBX8 426 aa16.25■□□□□ 0.19
ERCC3-203ENST00000445889 SRRTQ9BXP5 876 aaKnown RBP16.25■□□□□ 0.19
ERCC3-203ENST00000445889 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 MMP1P03956 469 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
ERCC3-203ENST00000445889 SAFBQ15424 915 aaKnown RBP eCLIP16.24■□□□□ 0.19
ERCC3-203ENST00000445889 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 VPS54Q9P1Q0 977 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 MRFAP1Q9Y605 127 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-203ENST00000445889 CSF1RP07333 972 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 GTF2E1P29083 439 aaPredicted RBP16.24■□□□□ 0.19
ERCC3-203ENST00000445889 CCT6AP40227 531 aaKnown RBP16.24■□□□□ 0.19
ERCC3-203ENST00000445889 TDO2P48775 406 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 RAI14Q9P0K7 980 aa16.24■□□□□ 0.19
ERCC3-203ENST00000445889 ANKRD18BA2A2Z9 1011 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
ERCC3-203ENST00000445889 ZNF18P17022 549 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 MPHOSPH8Q99549 860 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 MAPK8IP1Q9UQF2 711 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 PDE8BO95263 885 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 PTPREP23469 700 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 RTN1Q16799 776 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 MFSD6Q6ZSS7 791 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 LCORLQ8N3X6 602 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 TMEM87BQ96K49 555 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 ARFGAP3Q9NP61 516 aa16.23■□□□□ 0.19
ERCC3-203ENST00000445889 STX10O60499 249 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 FMNL1O95466 1100 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-203ENST00000445889 SDR42E1Q8WUS8 393 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 BLZF1Q9H2G9 400 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 TCRBV5S4A2TA0A5A2 114 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 WTIPA6NIX2 430 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-203ENST00000445889 RHOXF2BP0C7M4 288 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 ZNF569Q5MCW4 686 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 NLRP10Q86W26 655 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 CDC5LQ99459 802 aaKnown RBP16.22■□□□□ 0.19
ERCC3-203ENST00000445889 RHOXF2Q9BQY4 288 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
ERCC3-203ENST00000445889 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 CAPN2P17655 700 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 MORC3Q14149 939 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 NR1I3Q14994 352 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 GPR161Q8N6U8 529 aaKnown RBP16.22■□□□□ 0.19
ERCC3-203ENST00000445889 ACRBPQ8NEB7 543 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
ERCC3-203ENST00000445889 PCDH11XQ9BZA7 1347 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 PCDH11YQ9BZA8 1340 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 CYP2D7A0A087X1C5 515 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
ERCC3-203ENST00000445889 BCAMP50895 628 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 CTSWP56202 376 aa16.21■□□□□ 0.19
ERCC3-203ENST00000445889 WTAPQ15007 396 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms