RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 TFCP2Q12800 502 aa11.4□□□□□ -0.59
LINC00642-203ENST00000444942 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.59
LINC00642-203ENST00000444942 SHHQ15465 462 aa11.4□□□□□ -0.59
LINC00642-203ENST00000444942 LRRC26Q2I0M4 334 aa11.4□□□□□ -0.59
LINC00642-203ENST00000444942 VPS37DQ86XT2 251 aa11.4□□□□□ -0.59
LINC00642-203ENST00000444942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.4□□□□□ -0.59
LINC00642-203ENST00000444942 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 CIAO1O76071 339 aa11.39□□□□□ -0.59
LINC00642-203ENST00000444942 IFIT1P09914 478 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 SLC5A1P13866 664 aa11.39□□□□□ -0.59
LINC00642-203ENST00000444942 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 IL15P40933 162 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 CHAF1AQ13111 956 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 MTX1Q13505 466 aa11.39□□□□□ -0.59
LINC00642-203ENST00000444942 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 CEP85Q6P2H3 762 aa11.39□□□□□ -0.59
LINC00642-203ENST00000444942 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 PARK7Q99497 189 aaKnown RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 HMX1Q9NP08 348 aaPredicted RBP11.39□□□□□ -0.59
LINC00642-203ENST00000444942 FRMPD3Q5JV73 1810 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 APBB1O00213 710 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 ADORA1P30542 326 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 TIMM10P62072 90 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 PPATQ06203 517 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 MOGSQ13724 837 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 POLA2Q14181 598 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 GRIN2CQ14957 1233 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 ATP2B3Q16720 1220 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 CAVIN4Q5BKX8 364 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 TMEM31Q5JXX7 168 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 C9orf50Q5SZB4 431 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 EPHX3Q9H6B9 360 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 ZBTB40Q9NUA8 1239 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
LINC00642-203ENST00000444942 HMGCRP04035 888 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 CYP2C8P10632 490 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 FGFR2P21802 821 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
LINC00642-203ENST00000444942 SSH3Q8TE77 659 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 ZKSCAN4Q969J2 545 aaPredicted RBP11.37□□□□□ -0.59
LINC00642-203ENST00000444942 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
LINC00642-203ENST00000444942 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 ZNF70Q9UC06 446 aaPredicted RBP11.37□□□□□ -0.59
LINC00642-203ENST00000444942 EXOC6BQ9Y2D4 811 aa11.37□□□□□ -0.59
LINC00642-203ENST00000444942 RBM19Q9Y4C8 960 aaKnown RBP11.37□□□□□ -0.59
LINC00642-203ENST00000444942 IL1R1P14778 569 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00642-203ENST00000444942 CENPQQ7L2Z9 268 aaPredicted RBP11.36□□□□□ -0.59
LINC00642-203ENST00000444942 LPIN2Q92539 896 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 KCNH4Q9UQ05 1017 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
LINC00642-203ENST00000444942 A0A1B0GUL7 405 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 PTPRFP10586 1907 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 PHKA1P46020 1223 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 AAMPQ13685 434 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 FBXO33Q7Z6M2 555 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 TDRD7Q8NHU6 1098 aaKnown RBP11.35□□□□□ -0.59
LINC00642-203ENST00000444942 PPM1EQ8WY54 764 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
LINC00642-203ENST00000444942 XIRP2A4UGR9 3374 aa11.35□□□□□ -0.59
LINC00642-203ENST00000444942 GPR37L1O60883 481 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 TNNI2P48788 182 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 TRIM32Q13049 653 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 GORABQ5T7V8 394 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 COA7Q96BR5 231 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 XAGE2Q96GT9 111 aa11.34□□□□□ -0.59
LINC00642-203ENST00000444942 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
LINC00642-203ENST00000444942 REV3LO60673 3130 aa11.33□□□□□ -0.59
LINC00642-203ENST00000444942 TCP10L2B9ZVM9 353 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 FKBP1AP62942 108 aaKnown RBP11.33□□□□□ -0.6
LINC00642-203ENST00000444942 MFSD14BQ5SR56 506 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 RPAP2Q8IXW5 612 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-203ENST00000444942 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
LINC00642-203ENST00000444942 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 C11orf16Q9NQ32 467 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 AKAP2Q9Y2D5 859 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 ZDBF2Q9HCK1 2354 aa11.33□□□□□ -0.6
LINC00642-203ENST00000444942 MYO5AQ9Y4I1 1855 aaKnown RBP11.32□□□□□ -0.6
LINC00642-203ENST00000444942 HMMRO75330 724 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 BMP1P13497 986 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 GRIK5Q16478 980 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 RLFQ13129 1914 aa11.32□□□□□ -0.6
LINC00642-203ENST00000444942 TNNI3KQ59H18 835 aa11.31□□□□□ -0.6
LINC00642-203ENST00000444942 GAS2L1Q99501 681 aaPredicted RBP11.31□□□□□ -0.6
LINC00642-203ENST00000444942 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
LINC00642-203ENST00000444942 GNL3LQ9NVN8 582 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms