RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
SSBP3-208ENST00000444533 NOGQ13253 232 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 SLC4A8Q2Y0W8 1093 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 LDLRAD1Q5T700 205 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
SSBP3-208ENST00000444533 FAM227BQ96M60 508 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
SSBP3-208ENST00000444533 EHD4Q9H223 541 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 ZNF287Q9HBT7 754 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 FZD1Q9UP38 647 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
SSBP3-208ENST00000444533 A0A0D9SFI3 127 aa16.84■□□□□ 0.29
SSBP3-208ENST00000444533 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
SSBP3-208ENST00000444533 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
SSBP3-208ENST00000444533 SWAP70Q9UH65 585 aa16.84■□□□□ 0.29
SSBP3-208ENST00000444533 CCDC171Q6TFL3 1326 aa16.84■□□□□ 0.29
SSBP3-208ENST00000444533 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
SSBP3-208ENST00000444533 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
SSBP3-208ENST00000444533 GSG1L2A8MUP6 293 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 USP17L12C9JPN9 530 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 USP17L21D6R901 530 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 VGLL4Q14135 290 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 RAD50Q92878 1312 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 ELP3Q9H9T3 547 aa16.83■□□□□ 0.28
SSBP3-208ENST00000444533 MINDY4BA8MYZ0 360 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 SLC10A3P09131 477 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 MAP2K2P36507 400 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 VEGFBP49765 207 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 ERO1BQ86YB8 467 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-208ENST00000444533 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 ZKSCAN4Q969J2 545 aaPredicted RBP16.82■□□□□ 0.28
SSBP3-208ENST00000444533 BEGAINQ9BUH8 593 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 CABP5Q9NP86 173 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 ZNF112Q9UJU3 913 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 MYH1P12882 1939 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
SSBP3-208ENST00000444533 ZBTB48P10074 688 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-208ENST00000444533 CHMLP26374 656 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 INPP5BP32019 993 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 PLCD1P51178 756 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 SBK1Q52WX2 424 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 NOL9Q5SY16 702 aaKnown RBP16.81■□□□□ 0.28
SSBP3-208ENST00000444533 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.81■□□□□ 0.28
SSBP3-208ENST00000444533 KIAA1211Q6ZU35 1233 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 RASAL3Q86YV0 1011 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 CDK5RAP2Q96SN8 1893 aa16.81■□□□□ 0.28
SSBP3-208ENST00000444533 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 ASNSP08243 561 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 CERKLQ49MI3 558 aaPredicted RBP16.8■□□□□ 0.28
SSBP3-208ENST00000444533 METTL16Q86W50 562 aaKnown RBP16.8■□□□□ 0.28
SSBP3-208ENST00000444533 OPTNQ96CV9 577 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 MKNK2Q9HBH9 465 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 CTNNA3Q9UI47 895 aa16.8■□□□□ 0.28
SSBP3-208ENST00000444533 PHF20L1A8MW92 1017 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 CDC45O75419 566 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 HSPD1P10809 573 aaKnown RBP16.79■□□□□ 0.28
SSBP3-208ENST00000444533 CAP2P40123 477 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 MAP2K1Q02750 393 aaPredicted RBP16.79■□□□□ 0.28
SSBP3-208ENST00000444533 PPATQ06203 517 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 PDE4BQ07343 736 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 SKAP1Q86WV1 359 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 AS3MTQ9HBK9 375 aa16.79■□□□□ 0.28
SSBP3-208ENST00000444533 MANSC4A6NHS7 340 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-208ENST00000444533 SPDYE5A6NIY4 337 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 MPHOSPH10O00566 681 aaKnown RBP16.78■□□□□ 0.28
SSBP3-208ENST00000444533 CYP2D6P10635 497 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 GTF2A2P52657 109 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 INHBEP58166 350 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
SSBP3-208ENST00000444533 ALX1Q15699 326 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 ZNF589Q86UQ0 364 aaPredicted RBP16.78■□□□□ 0.28
SSBP3-208ENST00000444533 DNAJC5GQ8N7S2 189 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 CCDC17Q96LX7 622 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 SNCAIPQ9Y6H5 919 aa16.78■□□□□ 0.28
SSBP3-208ENST00000444533 PPARAQ07869 468 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 PPIL2Q13356 520 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 SNAPC2Q13487 334 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 ABCB5Q2M3G0 1257 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 TATDN1Q6P1N9 297 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 C16orf86Q6ZW13 317 aa16.77■□□□□ 0.28
SSBP3-208ENST00000444533 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-208ENST00000444533 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
SSBP3-208ENST00000444533 ZMYM6O95789 1325 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
SSBP3-208ENST00000444533 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms