RNA–Protein interactions for RNA: ENST00000443218.1

ODC1-203, Transcript of ornithine decarboxylase 1, humanhuman

TSL 2

Gene ODC1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ODC1-203ENST00000443218 NECAB2Q7Z6G3 386 aa20.29■□□□□ 0.84
ODC1-203ENST00000443218 PROCA1Q8NCQ7 364 aaPredicted RBP20.29■□□□□ 0.84
ODC1-203ENST00000443218 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
ODC1-203ENST00000443218 DDX60LQ5H9U9 1706 aaKnown RBP20.29■□□□□ 0.84
ODC1-203ENST00000443218 SIPA1L1O43166 1804 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 PEX10O60683 326 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 CAPN2P17655 700 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 BMP8BP34820 402 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 C7orf61Q8IZ16 206 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 XAGE2Q96GT9 111 aa20.28■□□□□ 0.84
ODC1-203ENST00000443218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.28■□□□□ 0.84
ODC1-203ENST00000443218 ZMYND8Q9ULU4 1186 aaPredicted RBP20.28■□□□□ 0.84
ODC1-203ENST00000443218 A0A1B0GUL7 405 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
ODC1-203ENST00000443218 HMGCRP04035 888 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 HMGCS2P54868 508 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 ZNF280CQ8ND82 737 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 MEIS3Q99687 375 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 OSBPL5Q9H0X9 879 aaPredicted RBP20.27■□□□□ 0.84
ODC1-203ENST00000443218 ASCC2Q9H1I8 757 aaPredicted RBP20.27■□□□□ 0.84
ODC1-203ENST00000443218 SMC4Q9NTJ3 1288 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 PNMA3Q9UL41 463 aa20.27■□□□□ 0.84
ODC1-203ENST00000443218 JAG1P78504 1218 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 TFCP2Q12800 502 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 SLF2Q8IX21 1173 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 TRIB2Q92519 343 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 HMG20BQ9P0W2 317 aa20.26■□□□□ 0.83
ODC1-203ENST00000443218 NOB1Q9ULX3 412 aaKnown RBP20.26■□□□□ 0.83
ODC1-203ENST00000443218 COL2A1P02458 1487 aaPredicted RBP20.25■□□□□ 0.83
ODC1-203ENST00000443218 SYN1P17600 705 aa20.25■□□□□ 0.83
ODC1-203ENST00000443218 CAP2P40123 477 aa20.25■□□□□ 0.83
ODC1-203ENST00000443218 GCLCP48506 637 aaPredicted RBP20.25■□□□□ 0.83
ODC1-203ENST00000443218 SH3D19Q5HYK7 790 aa20.25■□□□□ 0.83
ODC1-203ENST00000443218 SPTY2D1Q68D10 685 aaPredicted RBP20.25■□□□□ 0.83
ODC1-203ENST00000443218 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
ODC1-203ENST00000443218 NSUN4Q96CB9 384 aaKnown RBP20.25■□□□□ 0.83
ODC1-203ENST00000443218 RPTORQ8N122 1335 aa20.25■□□□□ 0.83
ODC1-203ENST00000443218 Q7L0L9 218 aa20.24■□□□□ 0.83
ODC1-203ENST00000443218 SHROOM1Q2M3G4 852 aaPredicted RBP20.23■□□□□ 0.83
ODC1-203ENST00000443218 MAP3K21Q5TCX8 1036 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
ODC1-203ENST00000443218 NBPF3Q9H094 633 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 TXNRD2Q9NNW7 524 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 HMX1Q9NP08 348 aaPredicted RBP20.23■□□□□ 0.83
ODC1-203ENST00000443218 MORF4L1Q9UBU8 362 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 OGDHLQ9ULD0 1010 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 PFASO15067 1338 aa20.23■□□□□ 0.83
ODC1-203ENST00000443218 USP17L5A8MUK1 530 aa20.22■□□□□ 0.83
ODC1-203ENST00000443218 MAGEA10P43363 369 aaPredicted RBP20.22■□□□□ 0.83
ODC1-203ENST00000443218 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
ODC1-203ENST00000443218 C11orf49Q9H6J7 331 aa20.22■□□□□ 0.83
ODC1-203ENST00000443218 CYP2B6P20813 491 aa20.21■□□□□ 0.83
ODC1-203ENST00000443218 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
ODC1-203ENST00000443218 DEFB123Q8N688 67 aa20.21■□□□□ 0.83
ODC1-203ENST00000443218 SPATA5Q8NB90 893 aa20.21■□□□□ 0.83
ODC1-203ENST00000443218 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
ODC1-203ENST00000443218 MTMR2Q13614 643 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 LRIT3Q3SXY7 679 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 GPR153Q6NV75 609 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 SH3RF3Q8TEJ3 882 aaPredicted RBP20.2■□□□□ 0.82
ODC1-203ENST00000443218 P2RX7Q99572 595 aaKnown RBP20.2■□□□□ 0.82
ODC1-203ENST00000443218 WDR18Q9BV38 432 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 TBC1D2Q9BYX2 928 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 AKAP2Q9Y2D5 859 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 A0A0C4DFX4 3053 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 CDK5RAP2Q96SN8 1893 aa20.2■□□□□ 0.82
ODC1-203ENST00000443218 SRGAP3O43295 1099 aa20.19■□□□□ 0.82
ODC1-203ENST00000443218 PRKAR2AP13861 404 aaKnown RBP20.19■□□□□ 0.82
ODC1-203ENST00000443218 ARID4AP29374 1257 aaPredicted RBP20.19■□□□□ 0.82
ODC1-203ENST00000443218 MCAMP43121 646 aa20.19■□□□□ 0.82
ODC1-203ENST00000443218 PABPC4Q13310 644 aaKnown RBP eCLIP20.19■□□□□ 0.824e-19■□□□□ 9.5
ODC1-203ENST00000443218 MTX1Q13505 466 aa20.19■□□□□ 0.82
ODC1-203ENST00000443218 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
ODC1-203ENST00000443218 MAP4K4O95819 1239 aaPredicted RBP20.18■□□□□ 0.82
ODC1-203ENST00000443218 LDHCP07864 332 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 COL6A1P12109 1028 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 HOXA7P31268 230 aaPredicted RBP20.18■□□□□ 0.82
ODC1-203ENST00000443218 BACE1P56817 501 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 Q3C1V9 767 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 TEX11Q8IYF3 940 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 USP6NLQ92738 828 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 API5Q9BZZ5 524 aaKnown RBP20.18■□□□□ 0.82
ODC1-203ENST00000443218 MTMR10Q9NXD2 777 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 RAI14Q9P0K7 980 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
ODC1-203ENST00000443218 HERC5Q9UII4 1024 aaKnown RBP20.18■□□□□ 0.82
ODC1-203ENST00000443218 GSTO1P78417 241 aa20.17■□□□□ 0.82
ODC1-203ENST00000443218 CACNB2Q08289 660 aaPredicted RBP20.17■□□□□ 0.82
ODC1-203ENST00000443218 LHX8Q68G74 356 aa20.17■□□□□ 0.82
ODC1-203ENST00000443218 TDHQ8IZJ6 230 aa20.17■□□□□ 0.82
ODC1-203ENST00000443218 FOCADQ5VW36 1801 aa20.16■□□□□ 0.82
ODC1-203ENST00000443218 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
ODC1-203ENST00000443218 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
ODC1-203ENST00000443218 CCND3P30281 292 aaPredicted RBP20.16■□□□□ 0.82
ODC1-203ENST00000443218 HERVK_113P62684 666 aa20.16■□□□□ 0.82
ODC1-203ENST00000443218 CCL14Q16627 93 aa20.16■□□□□ 0.82
ODC1-203ENST00000443218 ADGRA1Q86SQ6 560 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms