RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 DDRGK1Q96HY6 314 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 FAM227BQ96M60 508 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 HELLSQ9NRZ9 838 aa14.8□□□□□ -0.04
USP1-203ENST00000442679 FAM196BA6NMK8 535 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 GSG1L2A8MUP6 293 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 INPP5BP32019 993 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 NOGQ13253 232 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 NMIQ13287 307 aaPredicted RBP14.79□□□□□ -0.04
USP1-203ENST00000442679 MCMDC2Q4G0Z9 681 aa14.79□□□□□ -0.04
USP1-203ENST00000442679 CRACR2BQ8N4Y2 399 aaPredicted RBP14.79□□□□□ -0.04
USP1-203ENST00000442679 HERC5Q9UII4 1024 aaKnown RBP14.79□□□□□ -0.04
USP1-203ENST00000442679 A0A0D9SFI3 127 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 PATL2C9JE40 543 aaKnown RBP14.78□□□□□ -0.04
USP1-203ENST00000442679 HIP1O00291 1037 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 APPP05067 770 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 CYP2D6P10635 497 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 MAP2K2P36507 400 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 PLCD1P51178 756 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
USP1-203ENST00000442679 SPRYD7Q5W111 196 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 GIMAP6Q6P9H5 292 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 METTL16Q86W50 562 aaKnown RBP14.78□□□□□ -0.04
USP1-203ENST00000442679 DIAPH3Q9NSV4 1193 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
USP1-203ENST00000442679 SNCAIPQ9Y6H5 919 aa14.78□□□□□ -0.04
USP1-203ENST00000442679 USP17L12C9JPN9 530 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 USP17L21D6R901 530 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 CTNND1O60716 968 aaKnown RBP14.77□□□□□ -0.05
USP1-203ENST00000442679 KIF23Q02241 960 aaPredicted RBP14.77□□□□□ -0.05
USP1-203ENST00000442679 AMOTL1Q8IY63 956 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 JMYQ8N9B5 988 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 OPTNQ96CV9 577 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 WNK4Q96J92 1243 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 ZIC5Q96T25 663 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 NACAP1Q9BZK3 213 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 EHD4Q9H223 541 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.05
USP1-203ENST00000442679 MYH7P12883 1935 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 EVX2Q03828 476 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 NOL9Q5SY16 702 aaKnown RBP14.76□□□□□ -0.05
USP1-203ENST00000442679 CTR9Q6PD62 1173 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 CWC27Q6UX04 472 aaKnown RBP14.76□□□□□ -0.05
USP1-203ENST00000442679 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 DNAJC18Q9H819 358 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 AK9Q5TCS8 1911 aa14.76□□□□□ -0.05
USP1-203ENST00000442679 CYP2D7A0A087X1C5 515 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 SPDYE5A6NIY4 337 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 ZBTB48P10074 688 aaPredicted RBP14.75□□□□□ -0.05
USP1-203ENST00000442679 GJA5P36382 358 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 TDO2P48775 406 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 RRP1BQ14684 758 aaKnown RBP14.75□□□□□ -0.05
USP1-203ENST00000442679 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 ERO1BQ86YB8 467 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 SCYL3Q8IZE3 742 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
USP1-203ENST00000442679 EPB41L4AQ9HCS5 686 aaPredicted RBP14.75□□□□□ -0.05
USP1-203ENST00000442679 ARPP21Q9UBL0 812 aaPredicted RBP14.75□□□□□ -0.05
USP1-203ENST00000442679 CDK5RAP2Q96SN8 1893 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 FOCADQ5VW36 1801 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 CAP2P40123 477 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 MFAP1P55081 439 aaKnown RBP14.74□□□□□ -0.05
USP1-203ENST00000442679 MAP2K1Q02750 393 aaPredicted RBP14.74□□□□□ -0.05
USP1-203ENST00000442679 PPATQ06203 517 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 GABPAQ06546 454 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 SBK1Q52WX2 424 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 VPS53Q5VIR6 699 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 TATDN1Q6P1N9 297 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 ZNF589Q86UQ0 364 aaPredicted RBP14.74□□□□□ -0.05
USP1-203ENST00000442679 DYNLL2Q96FJ2 89 aa14.74□□□□□ -0.05
USP1-203ENST00000442679 CCDC171Q6TFL3 1326 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 SMIM22K7EJ46 135 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 PTPRAP18433 802 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 CHMLP26374 656 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 SHMT1P34896 483 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 PPIL2Q13356 520 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 CERKLQ49MI3 558 aaPredicted RBP14.73□□□□□ -0.05
USP1-203ENST00000442679 BMP2KLQ5H9B9 411 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 REM2Q8IYK8 340 aaPredicted RBP14.73□□□□□ -0.05
USP1-203ENST00000442679 NAPBQ9H115 298 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 ZHX2Q9Y6X8 837 aa14.73□□□□□ -0.05
USP1-203ENST00000442679 MANSC4A6NHS7 340 aaPredicted RBP14.72□□□□□ -0.05
USP1-203ENST00000442679 FOXP2O15409 715 aa14.72□□□□□ -0.05
USP1-203ENST00000442679 GDF11O95390 407 aa14.72□□□□□ -0.05
USP1-203ENST00000442679 HSPD1P10809 573 aaKnown RBP14.72□□□□□ -0.05
USP1-203ENST00000442679 JAG1P78504 1218 aa14.72□□□□□ -0.05
USP1-203ENST00000442679 ALX1Q15699 326 aa14.72□□□□□ -0.05
USP1-203ENST00000442679 RUFY2Q8WXA3 655 aa14.72□□□□□ -0.05
USP1-203ENST00000442679 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.72□□□□□ -0.05
USP1-203ENST00000442679 MYH1P12882 1939 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 IRF6O14896 467 aa14.71□□□□□ -0.05
USP1-203ENST00000442679 TM4SF4P48230 202 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms