RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 IL15P40933 162 aaPredicted RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 GRIK5Q16478 980 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 SLC9C1Q4G0N8 1177 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 NBPF11Q86T75 865 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 DZIP1Q86YF9 867 aaKnown RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 ZGPATQ8N5A5 531 aaKnown RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 DENND2AQ9ULE3 1009 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 PTPN22Q9Y2R2 807 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
VPS50-204ENST00000438395 ECM29Q5VYK3 1845 aa9.63□□□□□ -0.87
VPS50-204ENST00000438395 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 TCP10Q12799 353 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 PPIL2Q13356 520 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 APOBEC3HQ6NTF7 200 aaKnown RBP9.62□□□□□ -0.87
VPS50-204ENST00000438395 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 ZKSCAN4Q969J2 545 aaPredicted RBP9.62□□□□□ -0.87
VPS50-204ENST00000438395 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 PTPN18Q99952 460 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
VPS50-204ENST00000438395 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
VPS50-204ENST00000438395 SNCAIPQ9Y6H5 919 aa9.62□□□□□ -0.87
VPS50-204ENST00000438395 GNAI3P08754 354 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 PRDX5P30044 214 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
VPS50-204ENST00000438395 RFX5P48382 616 aaPredicted RBP9.61□□□□□ -0.87
VPS50-204ENST00000438395 SLC4A8Q2Y0W8 1093 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 GORABQ5T7V8 394 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 MIGA2Q7L4E1 593 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
VPS50-204ENST00000438395 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 FAM151AQ8WW52 585 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 GCC1Q96CN9 775 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 FAM198AQ9UFP1 575 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
VPS50-204ENST00000438395 TNRC18O15417 2968 aaPredicted RBP9.6□□□□□ -0.87
VPS50-204ENST00000438395 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 IRF6O14896 467 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 IPO8O15397 1037 aaKnown RBP9.6□□□□□ -0.87
VPS50-204ENST00000438395 PHKA1P46020 1223 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 PPATQ06203 517 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 MVPQ14764 893 aaKnown RBP9.6□□□□□ -0.87
VPS50-204ENST00000438395 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
VPS50-204ENST00000438395 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 ATG9AQ7Z3C6 839 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.6□□□□□ -0.87
VPS50-204ENST00000438395 ARMC5Q96C12 935 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 USP40Q9NVE5 1235 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 ABCF2Q9UG63 623 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 AKAP2Q9Y2D5 859 aa9.6□□□□□ -0.87
VPS50-204ENST00000438395 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 KIAA0100Q14667 2235 aaKnown RBP9.59□□□□□ -0.87
VPS50-204ENST00000438395 BTBD19C9JJ37 291 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 SMAPO00193 183 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 SRGAP3O43295 1099 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 TLR2O60603 784 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 GNRH1P01148 92 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
VPS50-204ENST00000438395 PARK7Q99497 189 aaKnown RBP9.59□□□□□ -0.87
VPS50-204ENST00000438395 MEIS3Q99687 375 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 PA2G4Q9UQ80 394 aaKnown RBP9.59□□□□□ -0.87
VPS50-204ENST00000438395 PTCH2Q9Y6C5 1203 aa9.59□□□□□ -0.87
VPS50-204ENST00000438395 HTTP42858 3142 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 CCER2I3L3R5 266 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 PDHXO00330 501 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 MYCP01106 439 aaPredicted RBP9.58□□□□□ -0.88
VPS50-204ENST00000438395 HOXD10P28358 340 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 INPP5BP32019 993 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 RARSP54136 660 aaKnown RBP9.58□□□□□ -0.88
VPS50-204ENST00000438395 PRMT2P55345 433 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
VPS50-204ENST00000438395 NFIAQ12857 509 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 RASGRF1Q13972 1273 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 CCDC102BQ68D86 513 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 ANKRD23Q86SG2 305 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 ANKK1Q8NFD2 765 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
VPS50-204ENST00000438395 COPRSQ9NQ92 184 aa9.58□□□□□ -0.88
VPS50-204ENST00000438395 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 ENTPD3O75355 529 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 FMNL1O95466 1100 aaPredicted RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 ADORA1P30542 326 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 RGS3P49796 1198 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 GSTO1P78417 241 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 OS9Q13438 667 aaPredicted RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 PICALMQ13492 652 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 NOL9Q5SY16 702 aaKnown RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 RAET1EQ8TD07 263 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 ARHGAP45Q92619 1136 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 ZNF333Q96JL9 665 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 NEUROD6Q96NK8 337 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 NOL10Q9BSC4 688 aaKnown RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
VPS50-204ENST00000438395 CPA4Q9UI42 421 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 CEP290O15078 2479 aa9.57□□□□□ -0.88
VPS50-204ENST00000438395 A0A1B0GUL7 405 aa9.56□□□□□ -0.88
VPS50-204ENST00000438395 GNAI2P04899 355 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms