RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 HMG20BQ9P0W2 317 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 CPA4Q9UI42 421 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 MROH7-TTC4A0A0A0MT08 1334 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
HMGCL-204ENST00000436439 MAST2Q6P0Q8 1798 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 SIPA1L1O43166 1804 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 GSPT1P15170 499 aaKnown RBP13.25□□□□□ -0.29
HMGCL-204ENST00000436439 RHBDL3P58872 404 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 MECOMQ03112 1051 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 PICALMQ13492 652 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 GPAT2Q6NUI2 795 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 PI4K2BQ8TCG2 481 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 SH3TC2Q8TF17 1288 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 ECHDC1Q9NTX5 307 aa13.25□□□□□ -0.29
HMGCL-204ENST00000436439 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
HMGCL-204ENST00000436439 ERC2O15083 957 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 GLRX3O76003 335 aaKnown RBP13.24□□□□□ -0.29
HMGCL-204ENST00000436439 MYCP01106 439 aaPredicted RBP13.24□□□□□ -0.29
HMGCL-204ENST00000436439 MAP3K10Q02779 954 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 FOCADQ5VW36 1801 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 ZSCAN29Q8IWY8 852 aaPredicted RBP13.24□□□□□ -0.29
HMGCL-204ENST00000436439 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
HMGCL-204ENST00000436439 GPR75-ASB3A0A0A6YYF3 556 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 PTPRAP18433 802 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 ARID4AP29374 1257 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-204ENST00000436439 MCAMP43121 646 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 KIF22Q14807 665 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 SPTY2D1Q68D10 685 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-204ENST00000436439 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
HMGCL-204ENST00000436439 SPATA5Q8NB90 893 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
HMGCL-204ENST00000436439 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
HMGCL-204ENST00000436439 DBNLQ9UJU6 430 aaKnown RBP13.23□□□□□ -0.29
HMGCL-204ENST00000436439 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 CXCL11O14625 94 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 CYP2C8P10632 490 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 OSBPP22059 807 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 PSMC4P43686 418 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 CCDC8Q9H0W5 538 aaPredicted RBP13.22□□□□□ -0.29
HMGCL-204ENST00000436439 AFG3L2Q9Y4W6 797 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 ZHX2Q9Y6X8 837 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 LOC285556D6RIA3 1793 aa13.22□□□□□ -0.29
HMGCL-204ENST00000436439 A0A0G2JLL6 359 aaPredicted RBP13.21□□□□□ -0.29
HMGCL-204ENST00000436439 ATP5JP18859 108 aa13.21□□□□□ -0.29
HMGCL-204ENST00000436439 PRRT2Q7Z6L0 340 aaPredicted RBP13.21□□□□□ -0.29
HMGCL-204ENST00000436439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.21□□□□□ -0.29
HMGCL-204ENST00000436439 TLR7Q9NYK1 1049 aaKnown RBP13.21□□□□□ -0.29
HMGCL-204ENST00000436439 MYH7P12883 1935 aa13.21□□□□□ -0.29
HMGCL-204ENST00000436439 GNRH1P01148 92 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 BCRP11274 1271 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 SDSP20132 328 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 MTFR1Q15390 333 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 SLC4A8Q2Y0W8 1093 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 GORABQ5T7V8 394 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 GADL1Q6ZQY3 521 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 IPO9Q96P70 1041 aaKnown RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 SRRDQ9UH36 339 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 DOCK3Q8IZD9 2030 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 PRMT2P55345 433 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 RRP1BQ14684 758 aaKnown RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 OSBPL5Q9H0X9 879 aaPredicted RBP13.2□□□□□ -0.3
HMGCL-204ENST00000436439 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
HMGCL-204ENST00000436439 COL2A1P02458 1487 aaPredicted RBP13.19□□□□□ -0.3
HMGCL-204ENST00000436439 MYPNQ86TC9 1320 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 TRIM75PA6NK02 468 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 TBC1D12O60347 775 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
HMGCL-204ENST00000436439 CDC45O75419 566 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
HMGCL-204ENST00000436439 LDHCP07864 332 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 FASTKD5Q7L8L6 764 aaKnown RBP13.19□□□□□ -0.3
HMGCL-204ENST00000436439 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
HMGCL-204ENST00000436439 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
HMGCL-204ENST00000436439 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 GSTO1P78417 241 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 PRKCZQ05513 592 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 SH3RF3Q8TEJ3 882 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-204ENST00000436439 SHISA4Q96DD7 197 aa13.18□□□□□ -0.3
HMGCL-204ENST00000436439 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms