RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 GRK4P32298 578 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 DDR2Q16832 855 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 FOXD4L6Q3SYB3 417 aaPredicted RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 ZC3H12AQ5D1E8 599 aaKnown RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 FOXD4L3Q6VB84 417 aaPredicted RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 ACAD11Q709F0 780 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 CYFIP1Q7L576 1253 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 PODNQ7Z5L7 613 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 FAM169BQ8N8A8 192 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 ZNF507Q8TCN5 953 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 PUS7Q96PZ0 661 aaKnown RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 ST7Q9NRC1 585 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
USP54-206ENST00000433394 KLHL3Q9UH77 587 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 MKL2Q9ULH7 1088 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 AP4E1Q9UPM8 1137 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 MAPK8IP1Q9UQF2 711 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 CSADQ9Y600 493 aa8.71□□□□□ -1.02
USP54-206ENST00000433394 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 GNB5O14775 395 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 RAG1P15918 1043 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 GMPRP36959 345 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 CDK8P49336 464 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 TAF7LQ5H9L4 462 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 FDX2Q6P4F2 183 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 NLRC3Q7RTR2 1065 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 TAB3Q8N5C8 712 aaPredicted RBP8.7□□□□□ -1.02
USP54-206ENST00000433394 WNT10AQ9GZT5 417 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 MRPL18Q9H0U6 180 aaKnown RBP8.7□□□□□ -1.02
USP54-206ENST00000433394 SSU72Q9NP77 194 aaKnown RBP8.7□□□□□ -1.02
USP54-206ENST00000433394 SNTG2Q9NY99 539 aa8.7□□□□□ -1.02
USP54-206ENST00000433394 PDPK1O15530 556 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 ADAM11O75078 769 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 DEAF1O75398 565 aaPredicted RBP8.69□□□□□ -1.02
USP54-206ENST00000433394 CTSBP07858 339 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 TMEM201Q5SNT2 666 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
USP54-206ENST00000433394 OVOS1Q6IE37 1185 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 IGF2-ASQ6U949 168 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 TTC6Q86TZ1 520 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 FAM13CQ8NE31 585 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
USP54-206ENST00000433394 PHAXQ9H814 394 aaKnown RBP8.69□□□□□ -1.02
USP54-206ENST00000433394 HIF3AQ9Y2N7 669 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 CORINQ9Y5Q5 1042 aa8.69□□□□□ -1.02
USP54-206ENST00000433394 MEGF11A6BM72 1044 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 ANKRD62A6NC57 917 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 DLL1O00548 723 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 NCAPHQ15003 741 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 HID1Q8IV36 788 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 PHACTR4Q8IZ21 702 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 RNF214Q8ND24 703 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 DHRS1Q96LJ7 313 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
USP54-206ENST00000433394 SLC22A31A6NKX4 558 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 ELNP15502 786 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 RASGRF1Q13972 1273 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 MTERF2Q49AM1 385 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 PPM1JQ5JR12 505 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 SLC6A19Q695T7 634 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 C12orf50Q8NA57 414 aaPredicted RBP8.67□□□□□ -1.02
USP54-206ENST00000433394 PLVAPQ9BX97 442 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 TMPRSS13Q9BYE2 586 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
USP54-206ENST00000433394 CWC22Q9HCG8 908 aaKnown RBP8.67□□□□□ -1.02
USP54-206ENST00000433394 KCNK4Q9NYG8 393 aa8.67□□□□□ -1.02
USP54-206ENST00000433394 A0A1W2PQH9 124 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 SART1O43290 800 aaKnown RBP8.66□□□□□ -1.02
USP54-206ENST00000433394 RNGTTO60942 597 aaKnown RBP8.66□□□□□ -1.02
USP54-206ENST00000433394 NAT2P11245 290 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 NME1P15531 152 aaKnown RBP8.66□□□□□ -1.02
USP54-206ENST00000433394 HSD3B2P26439 372 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 CCNFP41002 786 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 RASA3Q14644 834 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 ARSHQ5FYA8 562 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 ZBTB37Q5TC79 503 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 CDCP2Q5VXM1 449 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 RUFY4Q6ZNE9 571 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 EEPD1Q7L9B9 569 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 DYMQ7RTS9 669 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 SMG8Q8ND04 991 aaKnown RBP8.66□□□□□ -1.02
USP54-206ENST00000433394 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 YIPF2Q9BWQ6 316 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 CNNM2Q9H8M5 875 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 SUGCTQ9HAC7 445 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
USP54-206ENST00000433394 MRPL42Q9Y6G3 142 aaKnown RBP8.66□□□□□ -1.02
USP54-206ENST00000433394 TMPRSS2O15393 492 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 ADH5P11766 374 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 GBP1P32455 592 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
USP54-206ENST00000433394 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.02
USP54-206ENST00000433394 FAM178BQ8IXR5 827 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
USP54-206ENST00000433394 TNKS2Q9H2K2 1166 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms