RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 LAMB1P07942 1786 aa22.34■■□□□ 1.17
DDR1-236ENST00000431373 SLURP2P0DP57 97 aa22.33■■□□□ 1.17
DDR1-236ENST00000431373 INPP5BP32019 993 aa22.33■■□□□ 1.17
DDR1-236ENST00000431373 MAP2K2P36507 400 aa22.33■■□□□ 1.17
DDR1-236ENST00000431373 SEC62Q99442 399 aaKnown RBP22.33■■□□□ 1.17
DDR1-236ENST00000431373 ELP3Q9H9T3 547 aa22.33■■□□□ 1.17
DDR1-236ENST00000431373 FAM196BA6NMK8 535 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 PHF20L1A8MW92 1017 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
DDR1-236ENST00000431373 GNAT2P19087 354 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 TTC6Q86TZ1 520 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 FOXP4Q8IVH2 680 aaPredicted RBP22.32■■□□□ 1.16
DDR1-236ENST00000431373 CRACR2BQ8N4Y2 399 aaPredicted RBP22.32■■□□□ 1.16
DDR1-236ENST00000431373 ZKSCAN4Q969J2 545 aaPredicted RBP22.32■■□□□ 1.16
DDR1-236ENST00000431373 DDRGK1Q96HY6 314 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
DDR1-236ENST00000431373 MYH8P13535 1937 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 POLR3DP05423 398 aaPredicted RBP22.31■■□□□ 1.16
DDR1-236ENST00000431373 SPRYD7Q5W111 196 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 METTL16Q86W50 562 aaKnown RBP22.31■■□□□ 1.16
DDR1-236ENST00000431373 WNK4Q96J92 1243 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 TRIM34Q9BYJ4 488 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 HELLSQ9NRZ9 838 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 SNCAIPQ9Y6H5 919 aa22.31■■□□□ 1.16
DDR1-236ENST00000431373 SDSP20132 328 aa22.3■■□□□ 1.16
DDR1-236ENST00000431373 NOL9Q5SY16 702 aaKnown RBP22.3■■□□□ 1.16
DDR1-236ENST00000431373 EHD4Q9H223 541 aa22.3■■□□□ 1.16
DDR1-236ENST00000431373 HIP1O00291 1037 aa22.29■■□□□ 1.16
DDR1-236ENST00000431373 ZBTB48P10074 688 aaPredicted RBP22.29■■□□□ 1.16
DDR1-236ENST00000431373 MKRN3Q13064 507 aaKnown RBP22.29■■□□□ 1.16
DDR1-236ENST00000431373 NMIQ13287 307 aaPredicted RBP22.29■■□□□ 1.16
DDR1-236ENST00000431373 OPTNQ96CV9 577 aa22.29■■□□□ 1.16
DDR1-236ENST00000431373 FAM227BQ96M60 508 aa22.29■■□□□ 1.16
DDR1-236ENST00000431373 ZIC5Q96T25 663 aa22.29■■□□□ 1.16
DDR1-236ENST00000431373 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 SPDYE5A6NIY4 337 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 GSG1L2A8MUP6 293 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 CTNND1O60716 968 aaKnown RBP22.28■■□□□ 1.16
DDR1-236ENST00000431373 PLCD1P51178 756 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 KIF23Q02241 960 aaPredicted RBP22.28■■□□□ 1.16
DDR1-236ENST00000431373 GIMAP6Q6P9H5 292 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 ERO1BQ86YB8 467 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 AMOTL1Q8IY63 956 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 SCYL3Q8IZE3 742 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 DNAJC18Q9H819 358 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 DIAPH3Q9NSV4 1193 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 SERPINB13Q9UIV8 391 aa22.28■■□□□ 1.16
DDR1-236ENST00000431373 PHIPQ8WWQ0 1821 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 PATL2C9JE40 543 aaKnown RBP22.27■■□□□ 1.16
DDR1-236ENST00000431373 GJA5P36382 358 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 MCMDC2Q4G0Z9 681 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 CCDC129Q6ZRS4 1044 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 SKAP1Q86WV1 359 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 CNKSR2Q8WXI2 1034 aa22.27■■□□□ 1.16
DDR1-236ENST00000431373 USP17L12C9JPN9 530 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 USP17L21D6R901 530 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 APPP05067 770 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 CYP2D6P10635 497 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 MAP2K1Q02750 393 aaPredicted RBP22.26■■□□□ 1.15
DDR1-236ENST00000431373 OTUD5Q96G74 571 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 EPB41L4AQ9HCS5 686 aaPredicted RBP22.26■■□□□ 1.15
DDR1-236ENST00000431373 PICK1Q9NRD5 415 aa22.26■■□□□ 1.15
DDR1-236ENST00000431373 ARPP21Q9UBL0 812 aaPredicted RBP22.26■■□□□ 1.15
DDR1-236ENST00000431373 CAP2P40123 477 aa22.25■■□□□ 1.15
DDR1-236ENST00000431373 C12orf60Q5U649 245 aa22.25■■□□□ 1.15
DDR1-236ENST00000431373 CTR9Q6PD62 1173 aa22.25■■□□□ 1.15
DDR1-236ENST00000431373 REM2Q8IYK8 340 aaPredicted RBP22.25■■□□□ 1.15
DDR1-236ENST00000431373 NACAP1Q9BZK3 213 aa22.25■■□□□ 1.15
DDR1-236ENST00000431373 TDO2P48775 406 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 EVX2Q03828 476 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 PPATQ06203 517 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 GABPAQ06546 454 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 PPIL2Q13356 520 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 RRP1BQ14684 758 aaKnown RBP22.24■■□□□ 1.15
DDR1-236ENST00000431373 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 IFNL3Q8IZI9 196 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 TAOK2Q9UL54 1235 aa22.24■■□□□ 1.15
DDR1-236ENST00000431373 CYP2D7A0A087X1C5 515 aa22.23■■□□□ 1.15
DDR1-236ENST00000431373 MANSC4A6NHS7 340 aaPredicted RBP22.23■■□□□ 1.15
DDR1-236ENST00000431373 MFAP1P55081 439 aaKnown RBP22.23■■□□□ 1.15
DDR1-236ENST00000431373 TATDN1Q6P1N9 297 aa22.23■■□□□ 1.15
DDR1-236ENST00000431373 CWC27Q6UX04 472 aaKnown RBP22.23■■□□□ 1.15
DDR1-236ENST00000431373 ZNF589Q86UQ0 364 aaPredicted RBP22.23■■□□□ 1.15
DDR1-236ENST00000431373 WBP1LQ9NX94 342 aa22.23■■□□□ 1.15
DDR1-236ENST00000431373 CCDC171Q6TFL3 1326 aa22.23■■□□□ 1.15
DDR1-236ENST00000431373 PTPRFP10586 1907 aa22.23■■□□□ 1.15
DDR1-236ENST00000431373 PTPRAP18433 802 aa22.22■■□□□ 1.15
DDR1-236ENST00000431373 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
DDR1-236ENST00000431373 NAPBQ9H115 298 aa22.22■■□□□ 1.15
DDR1-236ENST00000431373 SWAP70Q9UH65 585 aa22.22■■□□□ 1.15
DDR1-236ENST00000431373 IRF6O14896 467 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 FOXP2O15409 715 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 GDF11O95390 407 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 SHMT1P34896 483 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 INHBEP58166 350 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 DYNLL2Q96FJ2 89 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 BEGAINQ9BUH8 593 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 GINM1Q9NU53 330 aa22.21■■□□□ 1.15
DDR1-236ENST00000431373 MINDY4BA8MYZ0 360 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms