RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 HDAC5Q9UQL6 1122 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 SIPA1L1O43166 1804 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 MAST2Q6P0Q8 1798 aa8.14□□□□□ -1.11
SMC6-205ENST00000430591 GJA5P36382 358 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 MECOMQ03112 1051 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 TCP10Q12799 353 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 GORABQ5T7V8 394 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
SMC6-205ENST00000430591 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 AACSQ86V21 672 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 RASAL3Q86YV0 1011 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 SPATA5Q8NB90 893 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 EXOC6Q8TAG9 804 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 WDR66Q8TBY9 1149 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 TEKT1Q969V4 418 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.13□□□□□ -1.11
SMC6-205ENST00000430591 SERPINA10Q9UK55 444 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 DENND2AQ9ULE3 1009 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 AKAP2Q9Y2D5 859 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 CASP8AP2Q9UKL3 1982 aa8.13□□□□□ -1.11
SMC6-205ENST00000430591 RFX7Q2KHR2 1363 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 SALL1Q9NSC2 1324 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 SMAPO00193 183 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 LDHBP07195 334 aaKnown RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 DYNLL1P63167 89 aaKnown RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 TTLL12Q14166 644 aaPredicted RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 TTC39AQ5SRH9 613 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 APOBEC3FQ8IUX4 373 aaKnown RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 C2orf69Q8N8R5 385 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 ANKK1Q8NFD2 765 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 OTUD7AQ8TE49 926 aaPredicted RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 TBC1D22AQ8WUA7 517 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 ZDHHC15Q96MV8 337 aa8.12□□□□□ -1.11
SMC6-205ENST00000430591 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 SUPT16HQ9Y5B9 1047 aaKnown RBP8.12□□□□□ -1.11
SMC6-205ENST00000430591 FOCADQ5VW36 1801 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 SOWAHBA6NEL2 793 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 FAM196BA6NMK8 535 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 USP2O75604 605 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 SLC10A3P09131 477 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 BTDP43251 543 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 RHBDL3P58872 404 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 KIF23Q02241 960 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 SHROOM1Q2M3G4 852 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 SLC4A8Q2Y0W8 1093 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 RGMBQ6NW40 437 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 MIGA2Q7L4E1 593 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 CCDC84Q86UT8 332 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 PACS2Q86VP3 889 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 RPAP2Q8IXW5 612 aaPredicted RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 NSUN4Q96CB9 384 aaKnown RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 GPR108Q9NPR9 543 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 USP40Q9NVE5 1235 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 GNL3LQ9NVN8 582 aaKnown RBP8.11□□□□□ -1.11
SMC6-205ENST00000430591 WBP1LQ9NX94 342 aa8.11□□□□□ -1.11
SMC6-205ENST00000430591 MROH7-TTC4A0A0A0MT08 1334 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 GAKO14976 1311 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 MYH7P12883 1935 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 DDTLA6NHG4 134 aaPredicted RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 WDHD1O75717 1129 aaPredicted RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 HSPA8P11142 646 aaKnown RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 MS4A1P11836 297 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 RGS3P49796 1198 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 LBX1P52954 281 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 PICALMQ13492 652 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 DZIP1Q86YF9 867 aaKnown RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 TTC13Q8NBP0 860 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 SH3RF3Q8TEJ3 882 aaPredicted RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 R3HDMLQ9H3Y0 253 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 RAI14Q9P0K7 980 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 RBM27Q9P2N5 1060 aaKnown RBP8.1□□□□□ -1.11
SMC6-205ENST00000430591 ZSWIM8A7E2V4 1837 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 ATRNL1Q5VV63 1379 aa8.1□□□□□ -1.11
SMC6-205ENST00000430591 PDS5AQ29RF7 1337 aaKnown RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 PHIPQ8WWQ0 1821 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 SMIM22K7EJ46 135 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 MYO1BO43795 1136 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 MAP4K4O95819 1239 aaPredicted RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 INPP5BP32019 993 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 RRP1BQ14684 758 aaKnown RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 LDLRAD1Q5T700 205 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 MIGA1Q8NAN2 632 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 TATDN2Q93075 761 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 ZKSCAN4Q969J2 545 aaPredicted RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 CSRNP1Q96S65 589 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 DNAJC2Q99543 621 aaKnown RBP8.09□□□□□ -1.11
SMC6-205ENST00000430591 BOLA2Q9H3K6 86 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 ELP3Q9H9T3 547 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 AATFQ9NY61 560 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMC6-205ENST00000430591 LAMB1P07942 1786 aa8.09□□□□□ -1.11
SMC6-205ENST00000430591 MYH1P12882 1939 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms