RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 DHX58Q96C10 678 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 CCDC34Q96HJ3 373 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 TMEM94Q12767 1356 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 A0A0G2JS52 829 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 ERICH2A1L162 156 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 EFCAB8A8MWE9 144 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 CASP1P29466 404 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 HSPA2P54652 639 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 CTSWP56202 376 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MAP3K12Q12852 859 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 WTAPQ15007 396 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 TC2NQ8N9U0 490 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 CCDC12Q8WUD4 166 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 WASF1Q92558 559 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 EPB41L4AQ9HCS5 686 aaPredicted RBP8.61□□□□□ -1.03
SMARCC1-202ENST00000425518 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 COBLO75128 1261 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 MMP1P03956 469 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 AKNAD1Q5T1N1 836 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SGMS1Q86VZ5 419 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 TMEM139Q8IV31 216 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 MLKLQ8NB16 471 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 TACC3Q9Y6A5 838 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SCN11AQ9UI33 1791 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 FAM237AA0A1B0GTK4 181 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 IFNAR1P17181 557 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 PTPREP23469 700 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SLC4A4Q9Y6R1 1079 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SPATA31A3Q5VYP0 1347 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 WDR17Q8IZU2 1322 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 TEX33O43247 280 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 STX10O60499 249 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 UQCRFS1P1P0C7P4 283 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 LIFRP42702 1097 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 RILPL1Q5EBL4 403 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 NUTM2AQ8IVF1 878 aaPredicted RBP8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SPATA5Q8NB90 893 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 PLA2G12BQ9BX93 195 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 SEC31BQ9NQW1 1179 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 RAI14Q9P0K7 980 aa8.6□□□□□ -1.03
SMARCC1-202ENST00000425518 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 ZBTB22O15209 634 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 TPM1P09493 284 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 PPFIBP1Q86W92 1011 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 PIGBQ92521 554 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 STAMQ92783 540 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 MAP3K15Q6ZN16 1313 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 ADAMTS7Q9UKP4 1686 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 TCRBV5S4A2TA0A5A2 114 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 ZRANB2O95218 330 aaKnown RBP eCLIP8.59□□□□□ -1.034e-12■■■■■ 42
SMARCC1-202ENST00000425518 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 TBX2Q13207 712 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 CADPS2Q86UW7 1296 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 SMYD4Q8IYR2 804 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 EPSTI1Q96J88 318 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 MED15Q96RN5 788 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 PARD6BQ9BYG5 372 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 NACAP1Q9BZK3 213 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 KRT23Q9C075 422 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 PUF60Q9UHX1 559 aaKnown RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 LMTK3Q96Q04 1460 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 GOLGA6L9A6NEM1 432 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 AKR1B15C9JRZ8 316 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 RASGRF1Q13972 1273 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 MORC3Q14149 939 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 LCORLQ8N3X6 602 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 CRACR2BQ8N4Y2 399 aaPredicted RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 LPIN2Q92539 896 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 UBAC1Q9BSL1 405 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 CNNM2Q9H8M5 875 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 MRPL44Q9H9J2 332 aaKnown RBP8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 LRP2BPQ9P2M1 347 aa8.59□□□□□ -1.03
SMARCC1-202ENST00000425518 MYO1BO43795 1136 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 PRDM1O75626 825 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF18P17022 549 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 PUM3Q15397 648 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 ARFGAP3Q9NP61 516 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 RIC1Q4ADV7 1423 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 A0A0U1RQJ8 604 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms