RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 AMOTL1Q8IY63 956 aa18.91■□□□□ 0.62
BRAT1-202ENST00000421712 DCP1AQ9NPI6 582 aaPredicted RBP18.91■□□□□ 0.62
BRAT1-202ENST00000421712 HERC5Q9UII4 1024 aaKnown RBP18.91■□□□□ 0.62
BRAT1-202ENST00000421712 COL2A1P02458 1487 aaPredicted RBP18.9■□□□□ 0.62
BRAT1-202ENST00000421712 MYH1P12882 1939 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 GNAT2P19087 354 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 KIF23Q02241 960 aaPredicted RBP18.9■□□□□ 0.62
BRAT1-202ENST00000421712 OPTNQ96CV9 577 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 WNK4Q96J92 1243 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 PICK1Q9NRD5 415 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 ZNF112Q9UJU3 913 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 FOCADQ5VW36 1801 aa18.9■□□□□ 0.62
BRAT1-202ENST00000421712 SDSP20132 328 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 MAP3K10Q02779 954 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 SPRYD7Q5W111 196 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 CCDC129Q6ZRS4 1044 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 TICAM2Q86XR7 235 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 JMYQ8N9B5 988 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 ZIC5Q96T25 663 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 HELLSQ9NRZ9 838 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 DIAPH3Q9NSV4 1193 aa18.89■□□□□ 0.61
BRAT1-202ENST00000421712 PHF20L1A8MW92 1017 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 PATL2C9JE40 543 aaKnown RBP18.88■□□□□ 0.61
BRAT1-202ENST00000421712 HIP1O00291 1037 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 PLCD1P51178 756 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
BRAT1-202ENST00000421712 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
BRAT1-202ENST00000421712 MCMDC2Q4G0Z9 681 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 SKAP1Q86WV1 359 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 OTUD5Q96G74 571 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 FAM227BQ96M60 508 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 SERPINB13Q9UIV8 391 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 SNCAIPQ9Y6H5 919 aa18.88■□□□□ 0.61
BRAT1-202ENST00000421712 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 USP17L21D6R901 530 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 CTNND1O60716 968 aaKnown RBP18.87■□□□□ 0.61
BRAT1-202ENST00000421712 CYP2D6P10635 497 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 GSPT1P15170 499 aaKnown RBP18.87■□□□□ 0.61
BRAT1-202ENST00000421712 TDO2P48775 406 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 ERO1BQ86YB8 467 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 SCYL3Q8IZE3 742 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 CNKSR2Q8WXI2 1034 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 NACAP1Q9BZK3 213 aa18.87■□□□□ 0.61
BRAT1-202ENST00000421712 A0A0D9SFI3 127 aa18.86■□□□□ 0.61
BRAT1-202ENST00000421712 GSG1L2A8MUP6 293 aa18.86■□□□□ 0.61
BRAT1-202ENST00000421712 ZBTB48P10074 688 aaPredicted RBP18.86■□□□□ 0.61
BRAT1-202ENST00000421712 NOL9Q5SY16 702 aaKnown RBP18.86■□□□□ 0.61
BRAT1-202ENST00000421712 CWC27Q6UX04 472 aaKnown RBP18.86■□□□□ 0.61
BRAT1-202ENST00000421712 NAV1Q8NEY1 1877 aa18.86■□□□□ 0.61
BRAT1-202ENST00000421712 OTOFQ9HC10 1997 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 CYP2D7A0A087X1C5 515 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 SPDYE5A6NIY4 337 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 GJA5P36382 358 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 GIMAP6Q6P9H5 292 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 REM2Q8IYK8 340 aaPredicted RBP18.85■□□□□ 0.61
BRAT1-202ENST00000421712 EHD4Q9H223 541 aa18.85■□□□□ 0.61
BRAT1-202ENST00000421712 BAZ2AQ9UIF9 1905 aaKnown RBP18.84■□□□□ 0.61
BRAT1-202ENST00000421712 MANSC4A6NHS7 340 aaPredicted RBP18.84■□□□□ 0.61
BRAT1-202ENST00000421712 CAP2P40123 477 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
BRAT1-202ENST00000421712 SREBF2Q12772 1141 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 METTL16Q86W50 562 aaKnown RBP18.84■□□□□ 0.61
BRAT1-202ENST00000421712 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 NAPBQ9H115 298 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 DNAJC18Q9H819 358 aa18.84■□□□□ 0.61
BRAT1-202ENST00000421712 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
BRAT1-202ENST00000421712 GDF11O95390 407 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 HSPA1AP0DMV8 641 aaKnown RBP18.83■□□□□ 0.6
BRAT1-202ENST00000421712 HSPA1BP0DMV9 641 aaKnown RBP18.83■□□□□ 0.6
BRAT1-202ENST00000421712 PTPRAP18433 802 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 EVX2Q03828 476 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 PPATQ06203 517 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 CERKLQ49MI3 558 aaPredicted RBP18.83■□□□□ 0.6
BRAT1-202ENST00000421712 STK11IPQ8N1F8 1099 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 DYNLL2Q96FJ2 89 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 ZHX2Q9Y6X8 837 aa18.83■□□□□ 0.6
BRAT1-202ENST00000421712 IRF6O14896 467 aa18.82■□□□□ 0.6
BRAT1-202ENST00000421712 GTF2A2P52657 109 aa18.82■□□□□ 0.6
BRAT1-202ENST00000421712 PPIL2Q13356 520 aa18.82■□□□□ 0.6
BRAT1-202ENST00000421712 RRP1BQ14684 758 aaKnown RBP18.82■□□□□ 0.6
BRAT1-202ENST00000421712 WBP1LQ9NX94 342 aa18.82■□□□□ 0.6
BRAT1-202ENST00000421712 SWAP70Q9UH65 585 aa18.82■□□□□ 0.6
BRAT1-202ENST00000421712 CCDC171Q6TFL3 1326 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 MPHOSPH10O00566 681 aaKnown RBP18.81■□□□□ 0.6
BRAT1-202ENST00000421712 INHBEP58166 350 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 SNAPC2Q13487 334 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 SBK1Q52WX2 424 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 VPS53Q5VIR6 699 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 TATDN1Q6P1N9 297 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 ZNF589Q86UQ0 364 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-202ENST00000421712 RUFY2Q8WXA3 655 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 EPB41L4AQ9HCS5 686 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-202ENST00000421712 CABP5Q9NP86 173 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.81■□□□□ 0.6
BRAT1-202ENST00000421712 SIPA1L1O43166 1804 aa18.81■□□□□ 0.6
BRAT1-202ENST00000421712 CCL15-CCL14A0A0B4J2E2 113 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms