RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 AMOTL1Q8IY63 956 aa27.72■■■□□ 2.03
SMARCB1-205ENST00000417137 HELLSQ9NRZ9 838 aa27.72■■■□□ 2.03
SMARCB1-205ENST00000417137 AK9Q5TCS8 1911 aa27.72■■■□□ 2.03
SMARCB1-205ENST00000417137 HIP1O00291 1037 aa27.71■■■□□ 2.03
SMARCB1-205ENST00000417137 M0R2C6 588 aa27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 AOC2O75106 756 aa27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 GIMAP6Q6P9H5 292 aa27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 REM2Q8IYK8 340 aaPredicted RBP27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 ZKSCAN4Q969J2 545 aaPredicted RBP27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 ELP3Q9H9T3 547 aa27.7■■■□□ 2.02
SMARCB1-205ENST00000417137 MYH7P12883 1935 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 PHF20L1A8MW92 1017 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 CTNND1O60716 968 aaKnown RBP27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 ZBTB48P10074 688 aaPredicted RBP27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 SDSP20132 328 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 INPP5BP32019 993 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 MAP2K1Q02750 393 aaPredicted RBP27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 SPRYD7Q5W111 196 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 METTL16Q86W50 562 aaKnown RBP27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 EHD4Q9H223 541 aa27.69■■■□□ 2.02
SMARCB1-205ENST00000417137 MCMDC2Q4G0Z9 681 aa27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 NOL9Q5SY16 702 aaKnown RBP27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 WNK4Q96J92 1243 aa27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 SEC62Q99442 399 aaKnown RBP27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 SERPINB13Q9UIV8 391 aa27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 TAOK2Q9UL54 1235 aa27.68■■■□□ 2.02
SMARCB1-205ENST00000417137 PATL2C9JE40 543 aaKnown RBP27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 APPP05067 770 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 KIF23Q02241 960 aaPredicted RBP27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 SLC4A8Q2Y0W8 1093 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 ERO1BQ86YB8 467 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 OPTNQ96CV9 577 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 NACAP1Q9BZK3 213 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 PICK1Q9NRD5 415 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 DIAPH3Q9NSV4 1193 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 SNCAIPQ9Y6H5 919 aa27.67■■■□□ 2.02
SMARCB1-205ENST00000417137 GSG1L2A8MUP6 293 aa27.66■■■□□ 2.02
SMARCB1-205ENST00000417137 GSPT1P15170 499 aaKnown RBP27.66■■■□□ 2.02
SMARCB1-205ENST00000417137 SCYL3Q8IZE3 742 aa27.66■■■□□ 2.02
SMARCB1-205ENST00000417137 SPDYE5A6NIY4 337 aa27.65■■■□□ 2.02
SMARCB1-205ENST00000417137 FAM196BA6NMK8 535 aa27.65■■■□□ 2.02
SMARCB1-205ENST00000417137 PLCD1P51178 756 aa27.65■■■□□ 2.02
SMARCB1-205ENST00000417137 MFAP1P55081 439 aaKnown RBP27.65■■■□□ 2.02
SMARCB1-205ENST00000417137 FAM227BQ96M60 508 aa27.65■■■□□ 2.02
SMARCB1-205ENST00000417137 USP17L12C9JPN9 530 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 USP17L21D6R901 530 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 SLURP2P0DP57 97 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 INHBEP58166 350 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 PPATQ06203 517 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 MKRN3Q13064 507 aaKnown RBP27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 NMIQ13287 307 aaPredicted RBP27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 BEGAINQ9BUH8 593 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 PRDM10Q9NQV6 1147 aa27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 ARPP21Q9UBL0 812 aaPredicted RBP27.64■■■□□ 2.02
SMARCB1-205ENST00000417137 FOCADQ5VW36 1801 aa27.64■■■□□ 2.01
SMARCB1-205ENST00000417137 MANSC4A6NHS7 340 aaPredicted RBP27.63■■■□□ 2.01
SMARCB1-205ENST00000417137 CAP2P40123 477 aa27.63■■■□□ 2.01
SMARCB1-205ENST00000417137 SREBF2Q12772 1141 aa27.63■■■□□ 2.01
SMARCB1-205ENST00000417137 OTUD5Q96G74 571 aa27.63■■■□□ 2.01
SMARCB1-205ENST00000417137 A0A0D9SFI3 127 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 FOXN1O15353 648 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 TDO2P48775 406 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 SBK1Q52WX2 424 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 C12orf60Q5U649 245 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 CTR9Q6PD62 1173 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 IFNL3Q8IZI9 196 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 ZIC5Q96T25 663 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 GINM1Q9NU53 330 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 SWAP70Q9UH65 585 aa27.62■■■□□ 2.01
SMARCB1-205ENST00000417137 CDK5RAP2Q96SN8 1893 aa27.61■■■□□ 2.01
SMARCB1-205ENST00000417137 PPIL2Q13356 520 aa27.61■■■□□ 2.01
SMARCB1-205ENST00000417137 CWC27Q6UX04 472 aaKnown RBP27.61■■■□□ 2.01
SMARCB1-205ENST00000417137 CCDC129Q6ZRS4 1044 aa27.61■■■□□ 2.01
SMARCB1-205ENST00000417137 DNAJC18Q9H819 358 aa27.61■■■□□ 2.01
SMARCB1-205ENST00000417137 CYP2D6P10635 497 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 PTPRAP18433 802 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 GJA5P36382 358 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 CTCFP49711 727 aaPredicted RBP27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 GTF2A2P52657 109 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 TATDN1Q6P1N9 297 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 WBP1LQ9NX94 342 aa27.6■■■□□ 2.01
SMARCB1-205ENST00000417137 TM4SF4P48230 202 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 GABPAQ06546 454 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 CERKLQ49MI3 558 aaPredicted RBP27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 RUFY2Q8WXA3 655 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 CNKSR2Q8WXI2 1034 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 TBC1D2Q9BYX2 928 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 NAPBQ9H115 298 aa27.59■■■□□ 2.01
SMARCB1-205ENST00000417137 ASNSP08243 561 aa27.58■■■□□ 2.01
SMARCB1-205ENST00000417137 ZHX2Q9Y6X8 837 aa27.58■■■□□ 2.01
SMARCB1-205ENST00000417137 MYH1P12882 1939 aa27.58■■■□□ 2.01
SMARCB1-205ENST00000417137 CCDC171Q6TFL3 1326 aa27.58■■■□□ 2.01
SMARCB1-205ENST00000417137 MINDY4BA8MYZ0 360 aa27.57■■■□□ 2
SMARCB1-205ENST00000417137 IRF6O14896 467 aa27.57■■■□□ 2
SMARCB1-205ENST00000417137 CA12O43570 354 aa27.57■■■□□ 2
SMARCB1-205ENST00000417137 SNAPC2Q13487 334 aa27.57■■■□□ 2
SMARCB1-205ENST00000417137 EPB41L4AQ9HCS5 686 aaPredicted RBP27.57■■■□□ 2
SMARCB1-205ENST00000417137 CYP2D7A0A087X1C5 515 aa27.56■■■□□ 2
SMARCB1-205ENST00000417137 RRP1BQ14684 758 aaKnown RBP27.56■■■□□ 2
SMARCB1-205ENST00000417137 BMP2KLQ5H9B9 411 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms