RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 SOX1O00570 391 aaPredicted RBP7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 GAS2O43903 313 aaKnown RBP7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 FMNL2Q96PY5 1086 aa7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 FAM129BQ96TA1 746 aa7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 BHLHE41Q9C0J9 482 aaPredicted RBP7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 POLR1AO95602 1720 aaPredicted RBP7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 MYO5BQ9ULV0 1848 aa7.06□□□□□ -1.28
ATG4AP1-201ENST00000416893 WDR64B1ANS9 1081 aa7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 MAP4P27816 1152 aaKnown RBP7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 TXKP42681 527 aa7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 IKBKEQ14164 716 aa7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 VN1R5Q7Z5H4 357 aa7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 BIN2Q9UBW5 565 aaPredicted RBP7.05□□□□□ -1.28
ATG4AP1-201ENST00000416893 SPHKAPQ2M3C7 1700 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 NEURL4Q96JN8 1562 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 PTPRTO14522 1441 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 SETD5Q9C0A6 1442 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 KDM5AP29375 1690 aaKnown RBP7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 EIF4EBP3O60516 100 aaPredicted RBP7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 WNT11O96014 354 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 IDI1Q13907 227 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 SGO2Q562F6 1265 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 PEAR1Q5VY43 1037 aaPredicted RBP7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 NUTM2GQ5VZR2 741 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 THEMISQ8N1K5 641 aaPredicted RBP7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 ASAP3Q8TDY4 903 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 MFSD14AQ96MC6 490 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 SLC52A1Q9NWF4 448 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 ADGRB3O60242 1522 aa7.04□□□□□ -1.28
ATG4AP1-201ENST00000416893 SLIT1O75093 1534 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 BTBD11A6QL63 1104 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 CPNE3O75131 537 aaKnown RBP7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 USP26Q9BXU7 913 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 SOX17Q9H6I2 414 aaPredicted RBP7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 CYP4F12Q9HCS2 524 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 LATS2Q9NRM7 1088 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 RAB3GAP2Q9H2M9 1393 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 ARHGAP23Q9P227 1491 aa7.03□□□□□ -1.28
ATG4AP1-201ENST00000416893 TIAF1O95411 115 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 RXRBP28702 533 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 HOXA10P31260 410 aaPredicted RBP7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 ANKLE2Q86XL3 938 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 GIMAP7Q8NHV1 300 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 DNAJC25Q9H1X3 360 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 SUGCTQ9HAC7 445 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 PIM2Q9P1W9 311 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 DCTN4Q9UJW0 460 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 TMEM2Q9UHN6 1383 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 SCAF11Q99590 1463 aaKnown RBP7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 IQGAP1P46940 1657 aa7.02□□□□□ -1.29
ATG4AP1-201ENST00000416893 TRPM2O94759 1503 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 TMEM131LA2VDJ0 1609 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 MED14O60244 1454 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 A0A1W2PP55 124 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 LIN7BQ9HAP6 207 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 ATG3Q9NT62 314 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 CLTCL1P53675 1640 aa7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 NPHP4O75161 1426 aaPredicted RBP7.01□□□□□ -1.29
ATG4AP1-201ENST00000416893 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
ATG4AP1-201ENST00000416893 GPR182O15218 404 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 DLGAP3O95886 979 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 F13BP05160 661 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 ESRRAP11474 423 aaPredicted RBP7□□□□□ -1.29
ATG4AP1-201ENST00000416893 LTKP29376 864 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 ORC1Q13415 861 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 EXOSC6Q5RKV6 272 aaKnown RBP7□□□□□ -1.29
ATG4AP1-201ENST00000416893 KIAA0319Q5VV43 1072 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 SND1Q7KZF4 910 aaKnown RBP eCLIP7□□□□□ -1.29
ATG4AP1-201ENST00000416893 CCNJLQ8IV13 435 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 FBXL6Q8N531 539 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 ALKBH8Q96BT7 664 aaKnown RBP7□□□□□ -1.29
ATG4AP1-201ENST00000416893 NIF3L1Q9GZT8 377 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 LEMD3Q9Y2U8 911 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 RNF114Q9Y508 228 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 ZFYVE9O95405 1425 aa7□□□□□ -1.29
ATG4AP1-201ENST00000416893 KIF1BO60333 1816 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 FAM95CA0A1B0GW59 222 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 CENPBP07199 599 aaPredicted RBP6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 NFKBIBQ15653 356 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 CPSF6Q16630 551 aaKnown RBP eCLIP6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 USPL1Q5W0Q7 1092 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 MPHOSPH9Q99550 1183 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 OSBPL1AQ9BXW6 950 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 EID1Q9Y6B2 187 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 RIMS2Q9UQ26 1411 aa6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 ZNF335Q9H4Z2 1342 aaPredicted RBP6.99□□□□□ -1.29
ATG4AP1-201ENST00000416893 LTBP4Q8N2S1 1624 aa6.98□□□□□ -1.29
ATG4AP1-201ENST00000416893 A0A096LPE4 126 aa6.98□□□□□ -1.29
ATG4AP1-201ENST00000416893 A0A1W2PPZ6 126 aa6.98□□□□□ -1.29
ATG4AP1-201ENST00000416893 IGHA2P01877 340 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms