RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CAP2P40123 477 aa21.81■■□□□ 1.08
CPNE1-210ENST00000416778 FOXP4Q8IVH2 680 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-210ENST00000416778 MAPKAPK5Q8IW41 473 aa21.81■■□□□ 1.08
CPNE1-210ENST00000416778 CLASRPQ8N2M8 674 aaKnown RBP21.81■■□□□ 1.08
CPNE1-210ENST00000416778 COL2A1P02458 1487 aaPredicted RBP21.81■■□□□ 1.08
CPNE1-210ENST00000416778 ADGRA2Q96PE1 1338 aa21.8■■□□□ 1.08
CPNE1-210ENST00000416778 TNRC18O15417 2968 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-210ENST00000416778 APBB1O00213 710 aa21.8■■□□□ 1.08
CPNE1-210ENST00000416778 CCDC84Q86UT8 332 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-210ENST00000416778 ARMC5Q96C12 935 aa21.8■■□□□ 1.08
CPNE1-210ENST00000416778 HERC5Q9UII4 1024 aaKnown RBP21.8■■□□□ 1.08
CPNE1-210ENST00000416778 CYP2C8P10632 490 aa21.79■■□□□ 1.08
CPNE1-210ENST00000416778 CTGFP29279 349 aa21.79■■□□□ 1.08
CPNE1-210ENST00000416778 KIF22Q14807 665 aa21.79■■□□□ 1.08
CPNE1-210ENST00000416778 MAGEB6Q8N7X4 407 aa21.79■■□□□ 1.08
CPNE1-210ENST00000416778 PALD1Q9ULE6 856 aa21.79■■□□□ 1.08
CPNE1-210ENST00000416778 TRIM75PA6NK02 468 aa21.78■■□□□ 1.08
CPNE1-210ENST00000416778 GNRH1P01148 92 aa21.78■■□□□ 1.08
CPNE1-210ENST00000416778 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
CPNE1-210ENST00000416778 TMED8Q6PL24 325 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-210ENST00000416778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.78■■□□□ 1.08
CPNE1-210ENST00000416778 SLC45A1Q9Y2W3 748 aa21.78■■□□□ 1.08
CPNE1-210ENST00000416778 FLT1P17948 1338 aa21.78■■□□□ 1.08
CPNE1-210ENST00000416778 IFIT2P09913 472 aaKnown RBP21.77■■□□□ 1.08
CPNE1-210ENST00000416778 BCRP11274 1271 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 JAG1P78504 1218 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 SPP2Q13103 211 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 GADL1Q6ZQY3 521 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 PTCH2Q9Y6C5 1203 aa21.77■■□□□ 1.08
CPNE1-210ENST00000416778 CENPFP49454 3210 aa21.76■■□□□ 1.07
CPNE1-210ENST00000416778 PSMC4P43686 418 aa21.76■■□□□ 1.07
CPNE1-210ENST00000416778 ZNF280CQ8ND82 737 aa21.76■■□□□ 1.07
CPNE1-210ENST00000416778 PARK7Q99497 189 aaKnown RBP21.76■■□□□ 1.07
CPNE1-210ENST00000416778 DNAJC18Q9H819 358 aa21.76■■□□□ 1.07
CPNE1-210ENST00000416778 POTEFA5A3E0 1075 aa21.75■■□□□ 1.07
CPNE1-210ENST00000416778 USP17L5A8MUK1 530 aa21.75■■□□□ 1.07
CPNE1-210ENST00000416778 TTF1Q15361 905 aaPredicted RBP21.75■■□□□ 1.07
CPNE1-210ENST00000416778 CERS3Q8IU89 383 aa21.75■■□□□ 1.07
CPNE1-210ENST00000416778 TRIM47Q96LD4 638 aa21.75■■□□□ 1.07
CPNE1-210ENST00000416778 TBC1D2Q9BYX2 928 aa21.75■■□□□ 1.07
CPNE1-210ENST00000416778 SAP30BPQ9UHR5 308 aaKnown RBP21.75■■□□□ 1.07
CPNE1-210ENST00000416778 DOCK2Q92608 1830 aa21.74■■□□□ 1.07
CPNE1-210ENST00000416778 PRMT2P55345 433 aa21.74■■□□□ 1.07
CPNE1-210ENST00000416778 ZNF333Q96JL9 665 aa21.74■■□□□ 1.07
CPNE1-210ENST00000416778 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
CPNE1-210ENST00000416778 WDR18Q9BV38 432 aa21.74■■□□□ 1.07
CPNE1-210ENST00000416778 AGTPBP1Q9UPW5 1226 aa21.74■■□□□ 1.07
CPNE1-210ENST00000416778 ECM2O94769 699 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-210ENST00000416778 SH3D19Q5HYK7 790 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 TREML2Q5T2D2 321 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 SLC9C2Q5TAH2 1124 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 NBPF11Q86T75 865 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 PROCA1Q8NCQ7 364 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-210ENST00000416778 BCL11AQ9H165 835 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 SRRDQ9UH36 339 aa21.73■■□□□ 1.07
CPNE1-210ENST00000416778 MYO5AQ9Y4I1 1855 aaKnown RBP21.73■■□□□ 1.07
CPNE1-210ENST00000416778 GOLIM4O00461 696 aa21.72■■□□□ 1.07
CPNE1-210ENST00000416778 FMNL1O95466 1100 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-210ENST00000416778 ATP5JP18859 108 aa21.72■■□□□ 1.07
CPNE1-210ENST00000416778 HOXD10P28358 340 aa21.72■■□□□ 1.07
CPNE1-210ENST00000416778 USP5P45974 858 aa21.72■■□□□ 1.07
CPNE1-210ENST00000416778 CRACR2BQ8N4Y2 399 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-210ENST00000416778 ASNSP08243 561 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 PDE6AP16499 860 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 OSBPP22059 807 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 SHROOM1Q2M3G4 852 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-210ENST00000416778 SLC9C1Q4G0N8 1177 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 EDC3Q96F86 508 aaKnown RBP21.71■■□□□ 1.07
CPNE1-210ENST00000416778 BOLA2Q9H3K6 86 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
CPNE1-210ENST00000416778 MAGEB6P1A0A0J9YX57 407 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 TCRBV5S4A2TA0A5A2 114 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 HLA-DOAP06340 250 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 HMGCS2P54868 508 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 DNAJC2Q99543 621 aaKnown RBP21.7■■□□□ 1.06
CPNE1-210ENST00000416778 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
CPNE1-210ENST00000416778 EN2P19622 333 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-210ENST00000416778 BACE1P56817 501 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 SLC4A8Q2Y0W8 1093 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 SH3TC2Q8TF17 1288 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 TRIM34Q9BYJ4 488 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 DCTPP1Q9H773 170 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 ZNF532Q9HCE3 1301 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 PHIPQ8WWQ0 1821 aa21.69■■□□□ 1.06
CPNE1-210ENST00000416778 KIAA0100Q14667 2235 aaKnown RBP21.68■■□□□ 1.06
CPNE1-210ENST00000416778 SMARCA5O60264 1052 aaPredicted RBP21.68■■□□□ 1.06
CPNE1-210ENST00000416778 PLCD1P51178 756 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 FCGRTP55899 365 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 TTC6Q86TZ1 520 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 HAUS7Q99871 368 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 TMEM106CQ9BVX2 250 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 EHD4Q9H223 541 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 PAG1Q9NWQ8 432 aa21.68■■□□□ 1.06
CPNE1-210ENST00000416778 DOCK1Q14185 1865 aa21.67■■□□□ 1.06
CPNE1-210ENST00000416778 C19orf81C9J6K1 198 aa21.67■■□□□ 1.06
CPNE1-210ENST00000416778 GDF11O95390 407 aa21.67■■□□□ 1.06
CPNE1-210ENST00000416778 SMCR8Q8TEV9 937 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms